How to predict structures with AlphaFold: Difference between revisions

From Proteopedia
Jump to navigationJump to search
Eric Martz (talk | contribs)
Eric Martz (talk | contribs)
Line 16: Line 16:


==Prediction Servers==
==Prediction Servers==
This is not a comprehensive list. Please add other servers of interest to a broad range of users, including beginners.


* New in 2024<ref name="af3" />: [https://alphafoldserver.com AlphaFoldServer.Com]. Predicts homo- and hetro-multimers involving protein, DNA, RNA, ligands, and modified residues. Straightforward to use; Guide and FAQ provided. Predictions are templated without user control (see FAQ). Free for non-commercial use -- see [https://alphafoldserver.com/terms Terms of Service] and [https://alphafoldserver.com/output-terms Output Terms of Use]. From the DeepMind team<ref name="af3" />.
* New in 2024<ref name="af3" />: [https://alphafoldserver.com AlphaFoldServer.Com]. Predicts homo- and hetro-multimers involving protein, DNA, RNA, ligands, and modified residues. Straightforward to use; Guide and FAQ provided. Predictions are templated without user control (see FAQ). Free for non-commercial use -- see [https://alphafoldserver.com/terms Terms of Service] and [https://alphafoldserver.com/output-terms Output Terms of Use]. From the DeepMind team<ref name="af3" />.
Line 24: Line 25:


*New in 2022<ref name="alphafill">PMID: 36424442</ref>: [https://alphafill.eu/ AlphaFill] “transplants” missing ligands, cofactors and (metal) ions into AlphaFold models. From the Perrakis team<ref name="alphafill" />.
*New in 2022<ref name="alphafill">PMID: 36424442</ref>: [https://alphafill.eu/ AlphaFill] “transplants” missing ligands, cofactors and (metal) ions into AlphaFold models. From the Perrakis team<ref name="alphafill" />.
*New in 2021<ref name="rosettafold">PMID: 34282049</ref>:


===COST===
===COST===