How to predict structures with AlphaFold: Difference between revisions
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==Is An Empirical Model Available?== | ==Is An Empirical Model Available?== | ||
Empirical models are the most accurate, so you should look for those first. See [[How To Find A Structure]]. If there is no empirical model for your amino acid sequence, it may be useful to explore [[How_To_Find_A_Structure#Sequence-Related_Empirical_Models|empirical models for closely-related sequences]], if available. | Empirical models are the most accurate, so you should look for those first. See [[How To Find A Structure]]. If there is no empirical model for your amino acid sequence, it may be useful to explore [[How_To_Find_A_Structure#Sequence-Related_Empirical_Models|empirical models for closely-related sequences]], if available. Even if an empirical structure is available, most have missing residues or atoms, and it may be useful to compare it with the AlphaFold prediction: see [[Missing residues and incomplete sidechains]]. | ||
==Does AlphaFold Database Already Have Your Protein?== | ==Does AlphaFold Database Already Have Your Protein?== | ||
