Converting AlphaFold3 CIF to PDB: Difference between revisions
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# Double-click the zip file to unzip it. | # Double-click the zip file to unzip it. | ||
# Drag the file with a name ending '''_model_0.cif''' into your working folder.<ref name="best">Each job produces 5 .cif files. The file with a name ending _model_0.cif is one of those with the highest pTM quality score.</ref> | # Drag the file with a name ending '''_model_0.cif''' into your working folder.<ref name="best">Each job produces 5 .cif files. The file with a name ending _model_0.cif is one of those with the highest pTM quality score.</ref> | ||
# Double-click Jmol.jar to run it. | |||
# Drag the _model_0.cif file and drop it into the black window of Jmol. The model should appear. | |||
# In the white ''Jmol Script Console'', enter the command '''write af3-jobname.pdb''', where ''jobname'' is a unique identifier for this model. | |||
# [http://firstglance.jmol.org#where.htm#uploading Upload] the af3-jobname.pdb to [http://firstglance.jmol.org FirstGlance in Jmol]. | |||
==Notes== | ==Notes== | ||
<references /> | <references /> | ||
