1umd: Difference between revisions

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[[Image:1umd.gif|left|200px]]
[[Image:1umd.gif|left|200px]]


{{Structure
<!--
|PDB= 1umd |SIZE=350|CAPTION= <scene name='initialview01'>1umd</scene>, resolution 1.90&Aring;
The line below this paragraph, containing "STRUCTURE_1umd", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
|LIGAND= <scene name='pdbligand=COI:2-OXO-4-METHYLPENTANOIC+ACID'>COI</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=TDP:THIAMIN+DIPHOSPHATE'>TDP</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/3-methyl-2-oxobutanoate_dehydrogenase_(2-methylpropanoyl-transferring) 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.2.4.4 1.2.4.4] </span>
or leave the SCENE parameter empty for the default display.
|GENE=  
-->
|DOMAIN=
{{STRUCTURE_1umd| PDB=1umd  | SCENE= }}  
|RELATEDENTRY=[[1um9|1UM9]], [[1umb|1UMB]], [[1umc|1UMC]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1umd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1umd OCA], [http://www.ebi.ac.uk/pdbsum/1umd PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1umd RCSB]</span>
}}


'''branched-chain 2-oxo acid dehydrogenase (E1) from Thermus thermophilus HB8 with 4-methyl-2-oxopentanoate as an intermediate'''
'''branched-chain 2-oxo acid dehydrogenase (E1) from Thermus thermophilus HB8 with 4-methyl-2-oxopentanoate as an intermediate'''
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==About this Structure==
==About this Structure==
1UMD is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UMD OCA].  
Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UMD OCA].  


==Reference==
==Reference==
Ligand-induced conformational changes and a reaction intermediate in branched-chain 2-oxo acid dehydrogenase (E1) from Thermus thermophilus HB8, as revealed by X-ray crystallography., Nakai T, Nakagawa N, Maoka N, Masui R, Kuramitsu S, Kamiya N, J Mol Biol. 2004 Apr 2;337(4):1011-33. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15033367 15033367]
Ligand-induced conformational changes and a reaction intermediate in branched-chain 2-oxo acid dehydrogenase (E1) from Thermus thermophilus HB8, as revealed by X-ray crystallography., Nakai T, Nakagawa N, Maoka N, Masui R, Kuramitsu S, Kamiya N, J Mol Biol. 2004 Apr 2;337(4):1011-33. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15033367 15033367]
[[Category: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring)]]
[[Category: Protein complex]]
[[Category: Thermus thermophilus]]
[[Category: Kamiya, N.]]
[[Category: Kamiya, N.]]
[[Category: Kuramitsu, S.]]
[[Category: Kuramitsu, S.]]
Line 33: Line 27:
[[Category: Nakai, T.]]
[[Category: Nakai, T.]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: alpha(2)beta(2) tetramer]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: Rsgi]]
[[Category: rsgi]]
[[Category: Structural genomic]]
[[Category: structural genomic]]
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Retrieved from "https://proteopedia.org/1umd"