2h5u: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
No edit summary
 
Line 4: Line 4:
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2h5u]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Trametes_maxima Trametes maxima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2H5U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2H5U FirstGlance]. <br>
<table><tr><td colspan='2'>[[2h5u]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Trametes_maxima Trametes maxima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2H5U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2H5U FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=NIY:META-NITRO-TYROSINE'>NIY</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NIY:META-NITRO-TYROSINE'>NIY</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1kya|1kya]]</div></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Laccase Laccase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.10.3.2 1.10.3.2] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2h5u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2h5u OCA], [https://pdbe.org/2h5u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2h5u RCSB], [https://www.ebi.ac.uk/pdbsum/2h5u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2h5u ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2h5u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2h5u OCA], [https://pdbe.org/2h5u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2h5u RCSB], [https://www.ebi.ac.uk/pdbsum/2h5u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2h5u ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/LAC1_TRAMX LAC1_TRAMX] Lignin degradation and detoxification of lignin-derived products.<ref>PMID:16944230</ref> <ref>PMID:17012782</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 15: Line 15:
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h5/2h5u_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h5/2h5u_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
Line 36: Line 36:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Laccase]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Trametes maxima]]
[[Category: Trametes maxima]]
[[Category: Bento, I]]
[[Category: Bento I]]
[[Category: Betzel, C]]
[[Category: Betzel C]]
[[Category: Gabdoulkhakov, A G]]
[[Category: Gabdoulkhakov AG]]
[[Category: Lamzin, V S]]
[[Category: Lamzin VS]]
[[Category: Lindley, P F]]
[[Category: Lindley PF]]
[[Category: Lyashenko, A V]]
[[Category: Lyashenko AV]]
[[Category: Mikhailov, A M]]
[[Category: Mikhailov AM]]
[[Category: Zaitsev, V N]]
[[Category: Zaitsev VN]]
[[Category: Zhukhlistova, N E]]
[[Category: Zhukhlistova NE]]
[[Category: Zhukova, Y N]]
[[Category: Zhukova YN]]
[[Category: Blue multi-copper enzyme]]
[[Category: Crystal]]
[[Category: Laccase from cerrena maxima]]
[[Category: Oxidoreductase]]
[[Category: Purification]]
[[Category: X-ray analyse]]
Retrieved from "https://proteopedia.org/2h5u"