3l44: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
Line 1: Line 1:


==Crystal structure of Bacillus anthracis HemL-1, glutamate semialdehyde aminotransferase==
==Crystal structure of Bacillus anthracis HemL-1, glutamate semialdehyde aminotransferase==
<StructureSection load='3l44' size='340' side='right' caption='[[3l44]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
<StructureSection load='3l44' size='340' side='right'caption='[[3l44]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3l44]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_anthracis_ames_"ancestor" Bacillus anthracis ames "ancestor"]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3L44 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3L44 FirstGlance]. <br>
<table><tr><td colspan='2'>[[3l44]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_anthracis_str._'Ames_Ancestor' Bacillus anthracis str. 'Ames Ancestor']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3L44 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3L44 FirstGlance]. <br>
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=LLP:(2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL]METHYLIDENEAMINO]HEXANOIC+ACID'>LLP</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">hemL1, BA_0531, GBAA_0531, BAS0499 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=261594 Bacillus anthracis Ames "Ancestor"])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LLP:(2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL]METHYLIDENEAMINO]HEXANOIC+ACID'>LLP</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glutamate-1-semialdehyde_2,1-aminomutase Glutamate-1-semialdehyde 2,1-aminomutase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.4.3.8 5.4.3.8] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3l44 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3l44 OCA], [https://pdbe.org/3l44 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3l44 RCSB], [https://www.ebi.ac.uk/pdbsum/3l44 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3l44 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3l44 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3l44 OCA], [http://pdbe.org/3l44 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3l44 RCSB], [http://www.ebi.ac.uk/pdbsum/3l44 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3l44 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/GSA1_BACAN GSA1_BACAN]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/l4/3l44_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/l4/3l44_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3l44 ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3l44 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
==See Also==
*[[Aminomutase 3D structures|Aminomutase 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Bacillus anthracis ames ancestor]]
[[Category: Bacillus anthracis str. 'Ames Ancestor']]
[[Category: Glutamate-1-semialdehyde 2,1-aminomutase]]
[[Category: Large Structures]]
[[Category: Anderson, S M]]
[[Category: Anderson SM]]
[[Category: Anderson, W F]]
[[Category: Anderson WF]]
[[Category: Structural genomic]]
[[Category: Edwards A]]
[[Category: Edwards, A]]
[[Category: Gordon E]]
[[Category: Gordon, E]]
[[Category: Hasseman J]]
[[Category: Hasseman, J]]
[[Category: Savchenko A]]
[[Category: Savchenko, A]]
[[Category: Wawrzak Z]]
[[Category: Wawrzak, Z]]
[[Category: Alpha beta class]]
[[Category: Bacillus anthracis]]
[[Category: Csgid]]
[[Category: Isomerase]]
[[Category: Plp-dependent transferase-like]]
[[Category: Porphyrin biosynthesis]]
[[Category: Pyridoxal phosphate]]

Latest revision as of 22:39, 26 March 2025

Crystal structure of Bacillus anthracis HemL-1, glutamate semialdehyde aminotransferase

3l44, resolution 2.05Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA