3r79: Difference between revisions

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<StructureSection load='3r79' size='340' side='right'caption='[[3r79]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
<StructureSection load='3r79' size='340' side='right'caption='[[3r79]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3r79]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrfc Agrfc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R79 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3R79 FirstGlance]. <br>
<table><tr><td colspan='2'>[[3r79]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R79 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3R79 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=PR:PRASEODYMIUM+ION'>PR</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=PR:PRASEODYMIUM+ION'>PR</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AGR_C_4983, Atu2747, PLPDE_III_YBL036c_like ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 AGRFC])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3r79 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3r79 OCA], [https://pdbe.org/3r79 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3r79 RCSB], [https://www.ebi.ac.uk/pdbsum/3r79 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3r79 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3r79 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3r79 OCA], [https://pdbe.org/3r79 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3r79 RCSB], [https://www.ebi.ac.uk/pdbsum/3r79 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3r79 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/A9CHE9_AGRFC A9CHE9_AGRFC] Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis.[HAMAP-Rule:MF_02087]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Agrfc]]
[[Category: Agrobacterium fabrum str. C58]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Almo, S C]]
[[Category: Almo SC]]
[[Category: Eswaramoorthy, S]]
[[Category: Eswaramoorthy S]]
[[Category: Structural genomic]]
[[Category: Swaminathan S]]
[[Category: Swaminathan, S]]
[[Category: Alanine racemase]]
[[Category: Metal ion]]
[[Category: Nysgrc]]
[[Category: Psi-biology]]
[[Category: Pyridoxal 5' phosphate]]
[[Category: Tim barrel]]
[[Category: Unknown function]]
[[Category: Ybl036c-like protein]]

Latest revision as of 22:45, 26 March 2025

Crystal structure of an uncharactertized protein from Agrobacterium tumefaciens

3r79, resolution 1.90Å

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