Jmol/Visualizing membrane position: Difference between revisions

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===Generate the Cylinder===
===Generate the Cylinder===


To generate the cylinder in the [[SAT]], click on the button below JSmol ''Advanced: Open JSmol Console''. The command to generate the cylinder will have this form:
To generate the cylinder '''IN THE [[SAT]]''', click on the button below JSmol ''Advanced: Open JSmol Console''. The command to generate the cylinder will have this form:
<pre>draw cyl1 cylinder diameter 100.0 color gray (thr607) (leu250)</pre>
<pre>draw cyl1 cylinder diameter 100.0 color gray (thr607) (leu250)</pre>
Adapt this command to your situation, copy and paste it into the LOWER box of the Console, and click the ''Run'' button at the lower-left of the console box.
Adapt this command to your situation, copy and paste it into the LOWER box of the Console, and click the ''Run'' button at the lower-left of the console box.