6au2: Difference between revisions
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<StructureSection load='6au2' size='340' side='right'caption='[[6au2]], [[Resolution|resolution]] 1.63Å' scene=''> | <StructureSection load='6au2' size='340' side='right'caption='[[6au2]], [[Resolution|resolution]] 1.63Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[6au2]] is a 1 chain structure with sequence from [ | <table><tr><td colspan='2'>[[6au2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6AU2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6AU2 FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene>, <scene name='pdbligand=CGJ:1-methyl-4H,6H-[1,2,4]triazolo[4,3-a][4,1]benzoxazepine'>CGJ</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.63Å</td></tr> | ||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene>, <scene name='pdbligand=CGJ:1-methyl-4H,6H-[1,2,4]triazolo[4,3-a][4,1]benzoxazepine'>CGJ</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6au2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6au2 OCA], [https://pdbe.org/6au2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6au2 RCSB], [https://www.ebi.ac.uk/pdbsum/6au2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6au2 ProSAT]</span></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | |||
</table> | </table> | ||
== Function == | == Function == | ||
[ | [https://www.uniprot.org/uniprot/SETB1_HUMAN SETB1_HUMAN] Histone methyltransferase that specifically trimethylates 'Lys-9' of histone H3. H3 'Lys-9' trimethylation represents a specific tag for epigenetic transcriptional repression by recruiting HP1 (CBX1, CBX3 and/or CBX5) proteins to methylated histones. Mainly functions in euchromatin regions, thereby playing a central role in the silencing of euchromatic genes. H3 'Lys-9' trimethylation is coordinated with DNA methylation. Probably forms a complex with MBD1 and ATF7IP that represses transcription and couples DNA methylation and histone 'Lys-9' trimethylation. Its activity is dependent on MBD1 and is heritably maintained through DNA replication by being recruited by CAF-1. SETDB1 is targeted to histone H3 by TRIM28/TIF1B, a factor recruited by KRAB zinc-finger proteins.<ref>PMID:12869583</ref> <ref>PMID:14536086</ref> <ref>PMID:15327775</ref> <ref>PMID:17952062</ref> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Homo sapiens]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Arrowsmith | [[Category: Arrowsmith CH]] | ||
[[Category: BROWN | [[Category: BROWN PJ]] | ||
[[Category: Bountra | [[Category: Bountra C]] | ||
[[Category: CORLESS | [[Category: CORLESS VB]] | ||
[[Category: DIAZ | [[Category: DELA SENA CC]] | ||
[[Category: DOBROVETSKY | [[Category: DIAZ D]] | ||
[[Category: DONG | [[Category: DOBROVETSKY E]] | ||
[[Category: Edwards | [[Category: DONG A]] | ||
[[Category: HOLOWNIA | [[Category: Edwards AM]] | ||
[[Category: IQBAL | [[Category: HOLOWNIA A]] | ||
[[Category: KENNEDY | [[Category: IQBAL A]] | ||
[[Category: LIEW | [[Category: KENNEDY S]] | ||
[[Category: MADER | [[Category: LIEW SK]] | ||
[[Category: Mendoza-Sanchez | [[Category: MADER P]] | ||
[[Category: SANTHAKUMAR | [[Category: Mendoza-Sanchez R]] | ||
[[Category: SANTHAKUMAR V]] | |||
[[Category: SMIL D]] | |||
[[Category: SMIL | [[Category: TEMPEL W]] | ||
[[Category: TEMPEL | [[Category: VEDADI M]] | ||
[[Category: VEDADI | [[Category: YUDIN AK]] | ||
[[Category: YUDIN | |||