4agi: Difference between revisions

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<StructureSection load='4agi' size='340' side='right'caption='[[4agi]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
<StructureSection load='4agi' size='340' side='right'caption='[[4agi]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4agi]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AGI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4AGI FirstGlance]. <br>
<table><tr><td colspan='2'>[[4agi]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Aspergillus_fumigatus Aspergillus fumigatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AGI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4AGI FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SFU:METHYL+6-DEOXY-1-SELENO-ALPHA-L-GALACTOPYRANOSIDE'>SFU</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CSD:3-SULFINOALANINE'>CSD</scene>, <scene name='pdbligand=CSK:S-(METHYLSELANYL)-L-CYSTEINE'>CSK</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CSD:3-SULFINOALANINE'>CSD</scene>, <scene name='pdbligand=CSK:S-(METHYLSELANYL)-L-CYSTEINE'>CSK</scene>, <scene name='pdbligand=SFU:METHYL+6-DEOXY-1-SELENO-ALPHA-L-GALACTOPYRANOSIDE'>SFU</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[4agt|4agt]], [[4ah4|4ah4]], [[4ah5|4ah5]], [[4aha|4aha]]</div></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4agi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4agi OCA], [https://pdbe.org/4agi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4agi RCSB], [https://www.ebi.ac.uk/pdbsum/4agi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4agi ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4agi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4agi OCA], [https://pdbe.org/4agi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4agi RCSB], [https://www.ebi.ac.uk/pdbsum/4agi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4agi ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/LECF_ASPFU LECF_ASPFU] Multispecific lectin that is able to recognize L-fucose in all possible linkages (PubMed:23695231, PubMed:27058347, PubMed:24340081, PubMed:25760594). These could be found not only in decomposed plant matter in soil, which is the natural environment for A.fumigatus, but also in various epitopes on human tissues (PubMed:25760594). Mediates binding of A.fumigatus conidia to airway mucinin a fucose dependent manner (PubMed:27058347). Stimulates IL-8 production by human bronchial cells in a dose-dependent manner, contributing to the inflammatory response observed upon the exposure of a patient to A.fumigatus, and thus might be an important virulence factor involved in an early stage of A.fumigatus infection (PubMed:24340081).<ref>PMID:23695231</ref> <ref>PMID:24340081</ref> <ref>PMID:25760594</ref> <ref>PMID:27058347</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Aspergillus fumigatus]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Cioci, G]]
[[Category: Cioci G]]
[[Category: Houser, J]]
[[Category: Houser J]]
[[Category: Imberty, A]]
[[Category: Imberty A]]
[[Category: Komarek, J]]
[[Category: Komarek J]]
[[Category: Kostlanova, N]]
[[Category: Kostlanova N]]
[[Category: Lahmann, M]]
[[Category: Lahmann M]]
[[Category: Varrot, A]]
[[Category: Varrot A]]
[[Category: Wimmerova, M]]
[[Category: Wimmerova M]]
[[Category: Sugar binding protein]]
[[Category: Sugar-binding protein]]
Retrieved from "https://proteopedia.org/4agi"