Sandbox Reserved 1846: Difference between revisions

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F243W
F243W


The original side chain is phenylalanine side chain, is located 3.6 Angstroms from the ligand. There are two main mutations isoleucine and tryptophan. Isoleucine is a smaller molecule and makes a tighter bond in the ligand, with the distance being 3.0 Angstrom. This allows for more efficient interactions with the ligand, likely improving substrate binding and catalytic efficiency. The other is tryptophan, which is a bulkier side chain, which does have a slightly shorter difference of 3.2 Angstroms, while being a larger side chain. The effect that is has is more based on that tryptophan is a nitrogen-containing aromatic ring, which offers new interactions with the substrate, which could also affect enzyme's binding and catalytic properties.
The original side chain at position 243 is phenylalanine, which is located 3.6 Å from the ligand. Two mutations at this position—F243I (isoleucine) and F243W (tryptophan)—increase the catalytic activity of the enzyme. The F243I mutation replaces phenylalanine with isoleucine, a smaller side chain that allows the ligand to sit closer. This reduces the ligand distance to 3.0 Å. This tighter interaction likely improves substrate binding. The F243W mutation introduces tryptophan, which has a bulkier, nitrogen-containing aromatic side chain. Tryptophan brings the ligand slightly closer at 3.2 Å and introduces potential for new interactions, such as hydrogen bonding or π-stacking. Both mutations result in improved catalytic performance. The F243I mutation leads to a 27.5% increase in activity, while the F243W mutation results in a 17.5% increase, compared to the wild-type enzyme.
These two mutations both lead to an increase in catalytic activity from the mutation, F243I had a 27.5% increase and F243W had an 17.5% increase, when compared to the wild-type variant.  
   
   
=== T96 ===
=== T96 ===