9bx4: Difference between revisions
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==Structure of influenza A RNP, 4xNP local reconstruction, class 6== | |||
<StructureSection load='9bx4' size='340' side='right'caption='[[9bx4]], [[Resolution|resolution]] 9.20Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[9bx4]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Influenza_A_virus Influenza A virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9BX4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9BX4 FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 9.2Å</td></tr> | |||
[[Category: | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9bx4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9bx4 OCA], [https://pdbe.org/9bx4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9bx4 RCSB], [https://www.ebi.ac.uk/pdbsum/9bx4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9bx4 ProSAT]</span></td></tr> | ||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/A0A516TQ93_9INFA A0A516TQ93_9INFA] Encapsidates the negative strand viral RNA, protecting it from nucleases. The encapsidated genomic RNA is termed the ribonucleoprotein (RNP) and serves as template for transcription and replication. The RNP needs to be localized in the host nucleus to start an infectious cycle, but is too large to diffuse through the nuclear pore complex. NP comprises at least 2 nuclear localization signals that are responsible for the active RNP import into the nucleus through cellular importin alpha/beta pathway. Later in the infection, nclear export of RNPs are mediated through viral proteins NEP interacting with M1 which binds nucleoproteins. It is possible that nucleoprotein binds directly host exportin-1/XPO1 and plays an active role in RNPs nuclear export. M1 interaction with RNP seems to hide nucleoprotein's nuclear localization signals. Soon after a virion infects a new cell, M1 dissociates from the RNP under acidification of the virion driven by M2 protein. Dissociation of M1 from RNP unmasks nucleoprotein's nuclear localization signals, targeting the RNP to the nucleus.[HAMAP-Rule:MF_04070] | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Influenza A virus]] | |||
[[Category: Large Structures]] | |||
[[Category: Chang Y-W]] | |||
[[Category: Peng R]] | |||
Latest revision as of 05:35, 14 May 2025
Structure of influenza A RNP, 4xNP local reconstruction, class 6
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