9itf: Difference between revisions

Line 1:

~~'''Unreleased structure'''~~

~~The entry~~ 9itf is ~~ON HOLD until Paper Publication~~

==Cryo-EM structure of full-length phyB(Y276H)-PIF6beta complex==

~~Authors~~:

== Structural highlights ==

<table><tr><td colspan='2'>[[9itf]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9ITF OCA]. For a guided tour on the structure components use [https://proteopedia.org/fgij/fg.htm?mol=9ITF FirstGlance].

~~Description~~:

</td></tr><tr id='method'><td class="sblockLbl">[[Empirical_models|Method:]]</td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.9Å</td></tr>

[[Category: ~~Unreleased~~ Structures]]

<tr id='ligand'><td class="sblockLbl">[[Ligand|Ligands:]]</td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=O6E:3-[2-[(~{Z})-[5-[(~{Z})-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-pyrrol-2-ylidene]methyl]-5-[(~{Z})-[(3~{R},4~{R})-3-ethyl-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic+acid'>O6E</scene></td></tr>

<tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[https://proteopedia.org/fgij/fg.htm?mol=9itf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9itf OCA], [https://pdbe.org/9itf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9itf RCSB], [https://www.ebi.ac.uk/pdbsum/9itf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9itf ProSAT]</td></tr>

</table>

== Function ==

[https://www.uniprot.org/uniprot/PHYB_ARATH PHYB_ARATH] Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. Photoconversion of Pr to Pfr induces an array of morphogenetic responses, whereas reconversion of Pfr to Pr cancels the induction of those responses. Pfr controls the expression of a number of nuclear genes including those encoding the small subunit of ribulose-bisphosphate carboxylase, chlorophyll A/B binding protein, protochlorophyllide reductase, rRNA, etc. It also controls the expression of its own gene(s) in a negative feedback fashion. Involved in the flowering time regulation.<ref>PMID:12468726</ref> <ref>PMID:15707897</ref>

== References ==

__TOC__

</StructureSection>

[[Category: Arabidopsis thaliana]]

[[Category: Large Structures]]

[[Category: Ding JY]]

[[Category: Guan ZY]]

[[Category: Jia HL]]

[[Category: Ma L]]

[[Category: Wang XY]]

[[Category: Yin P]]

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@@ Line 1: / Line 1: @@
-'''Unreleased structure'''
-The entry 9itf is ON HOLD  until Paper Publication
+==Cryo-EM structure of full-length phyB(Y276H)-PIF6beta complex==
+<StructureSection load='9itf' size='340' side='right'caption='[[9itf]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
-Authors:
+== Structural highlights ==
+<table><tr><td colspan='2'>[[9itf]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9ITF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9ITF FirstGlance]. <br>
-Description:
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
-[[Category: Unreleased Structures]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=O6E:3-[2-[(~{Z})-[5-[(~{Z})-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-pyrrol-2-ylidene]methyl]-5-[(~{Z})-[(3~{R},4~{R})-3-ethyl-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic+acid'>O6E</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9itf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9itf OCA], [https://pdbe.org/9itf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9itf RCSB], [https://www.ebi.ac.uk/pdbsum/9itf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9itf ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/PHYB_ARATH PHYB_ARATH] Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. Photoconversion of Pr to Pfr induces an array of morphogenetic responses, whereas reconversion of Pfr to Pr cancels the induction of those responses. Pfr controls the expression of a number of nuclear genes including those encoding the small subunit of ribulose-bisphosphate carboxylase, chlorophyll A/B binding protein, protochlorophyllide reductase, rRNA, etc. It also controls the expression of its own gene(s) in a negative feedback fashion. Involved in the flowering time regulation.<ref>PMID:12468726</ref> <ref>PMID:15707897</ref>
+== References ==
+<references/>
+__TOC__
+</StructureSection>
+[[Category: Arabidopsis thaliana]]
+[[Category: Large Structures]]
+[[Category: Ding JY]]
+[[Category: Guan ZY]]
+[[Category: Jia HL]]
+[[Category: Ma L]]
+[[Category: Wang XY]]
+[[Category: Yin P]]