1wkv: Difference between revisions

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[[Image:1wkv.gif|left|200px]]
[[Image:1wkv.gif|left|200px]]


{{Structure
<!--
|PDB= 1wkv |SIZE=350|CAPTION= <scene name='initialview01'>1wkv</scene>, resolution 2.0&Aring;
The line below this paragraph, containing "STRUCTURE_1wkv", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)
|LIGAND= <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5&#39;-PHOSPHATE'>PLP</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY=  
or leave the SCENE parameter empty for the default display.
|GENE= APE1586 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=56636 Aeropyrum pernix])
-->
|DOMAIN=
{{STRUCTURE_1wkv| PDB=1wkv  | SCENE= }}  
|RELATEDENTRY=
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1wkv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wkv OCA], [http://www.ebi.ac.uk/pdbsum/1wkv PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1wkv RCSB]</span>
}}


'''Crystal structure of O-phosphoserine sulfhydrylase'''
'''Crystal structure of O-phosphoserine sulfhydrylase'''
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[[Category: Mino, K.]]
[[Category: Mino, K.]]
[[Category: Oda, Y.]]
[[Category: Oda, Y.]]
[[Category: homodimer]]
[[Category: Homodimer]]
[[Category: open alpha/beta folding]]
[[Category: Open alpha/beta folding]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 13:49:15 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 00:37:41 2008''

Revision as of 10:49, 3 May 2008

File:1wkv.gif

Template:STRUCTURE 1wkv

Crystal structure of O-phosphoserine sulfhydrylase


Overview

O-Phosphoserine sulfhydrylase is a new enzyme found in a hyperthermophilic archaeon, Aeropyrum pernix K1. This enzyme catalyzes a novel cysteine synthetic reaction from O-phospho-l-serine and sulfide. The crystal structure of the enzyme was determined at 2.0A resolution using the method of multi-wavelength anomalous dispersion. A monomer consists of three domains, including an N-terminal domain with a new alpha/beta fold. The topology folds of the middle and C-terminal domains were similar to those of the O-acetylserine sulfhydrylase-A from Salmonella typhimurium and the cystathionine beta-synthase from human. The cofactor, pyridoxal 5'-phosphate, is bound in a cleft between the middle and C-terminal domains through a covalent linkage to Lys127. Based on the structure determined, O-phospho-l-serine could be rationally modeled into the active site of the enzyme. An enzyme-substrate complex model and a mutation experiment revealed that Arg297, unique to hyperthermophilic archaea, is one of the most crucial residues for O-phosphoserine sulfhydrylation activity. There are more hydrophobic areas and less electric charges at the dimer interface, compared to the S.typhimurium O-acetylserine sulfhydrylase.

About this Structure

1WKV is a Single protein structure of sequence from Aeropyrum pernix. Full crystallographic information is available from OCA.

Reference

Three-dimensional structure of a new enzyme, O-phosphoserine sulfhydrylase, involved in l-cysteine biosynthesis by a hyperthermophilic archaeon, Aeropyrum pernix K1, at 2.0A resolution., Oda Y, Mino K, Ishikawa K, Ataka M, J Mol Biol. 2005 Aug 12;351(2):334-44. PMID:16005886 Page seeded by OCA on Sat May 3 13:49:15 2008

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