22oz: Difference between revisions
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==Structural insights into HpaR-mediated recognition of hrpX and hrpG in Xanthomonas campestris pv. campestris== | |||
<StructureSection load='22oz' size='340' side='right'caption='[[22oz]], [[Resolution|resolution]] 2.51Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[22oz]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Xanthomonas_campestris_pv._campestris_str._ATCC_33913 Xanthomonas campestris pv. campestris str. ATCC 33913]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=22OZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=22OZ FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.511Å</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=22oz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=22oz OCA], [https://pdbe.org/22oz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=22oz RCSB], [https://www.ebi.ac.uk/pdbsum/22oz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=22oz ProSAT]</span></td></tr> | |||
</table> | |||
<div style="background-color:#fffaf0;"> | |||
== Publication Abstract from PubMed == | |||
HpaR is a transcriptional regulator belonging to the MarR family, which modulates bacterial virulence. Here, we report the biochemical and structural characterization of HpaR in Xanthomonas campestris pv. campestris (XcHpaR) and build a complex between HpaR and DNA. Our study revealed that XcHpaR can bind upstream of the divergently transcribed hrpX and hrpG genes and activate their transcription in vitro. Structural analysis of the XcHpaR dimer indicates that the monomer possesses an additional extended N-terminal alpha-helix (alpha0). Additionally, structural comparison uncovers that a winged-loop conformational change in the DNA-binding domain is essential for XcHpaR activation. Moreover, five key residues (K37, S53, K83, R89, R110) participate in DNA recognition, with R110 being highly conserved within the MarR family. This study provides valuable insights about the DNA recognition of XcHpaR and expands our understanding of the regulatory role of HpaR. | |||
Structural insights into HpaR-mediated recognition of hrpX and hrpG in Xanthomonas campestris pv. campestris.,Zuo M, Guo Q, Ning X, Wei J, Huang X, Zhang D, Su Z, Ming Z, Fu Q Biochem Biophys Res Commun. 2026 Mar 26;806:153429. doi: , 10.1016/j.bbrc.2026.153429. Epub 2026 Feb 7. PMID:41666606<ref>PMID:41666606</ref> | |||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |||
[[Category: | </div> | ||
<div class="pdbe-citations 22oz" style="background-color:#fffaf0;"></div> | |||
== References == | |||
<references/> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Large Structures]] | |||
[[Category: Xanthomonas campestris pv. campestris str. ATCC 33913]] | |||
[[Category: Fu Q]] | |||
[[Category: Ming Z]] | |||
Latest revision as of 08:53, 11 March 2026
Structural insights into HpaR-mediated recognition of hrpX and hrpG in Xanthomonas campestris pv. campestris
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