Nucleoporin 3D structures: Difference between revisions

*NUP2

**[[3n7c]] – NUP2 RANBD – ''Ashbya gossypii''<br />

**[[2c1t]] – yNUP2 NTD +importrin alpha subunit - yeast<br />

*NUP35

**[[1wwh]] – mNUP35 MPPN domain - mouse<br />

*NUP37

**[[4fhl]] – fyNUP37 – fission yeast<br />

**[[4fhm]], [[4fhn]], [[4gq2]] - fyNUP37 + NUP120<br />

*NUP43

**[[4i79]] – hNUP43 + polypeptide - human<br />

*NUP50

**[[2ec1]] – hNUP50 RANBD 337-468 <br />

**[[7mo0]] - hNUP50 RANBD + RAN<br />

**[[3tj3]] - hNUP50 NTD+importin<br />

**[[2c1m]] – mNUP50 NTD +importin <br />

*NUP53

**[[3p3d]] - NUP53 RRM domain - ''Pischia guillermondii''<br />

**[[4lir]] – hNUP53 residues 151-266<br />

**[[5hb8]], [[5hb7]] – CtNUP53 - ''Chaetomium thermophilum''<br />

**[[5hb3]] – CtNUP53 + NUP NIC96 <br />

*NUP54

**[[4jo7]], [[4jo9]] – hNUP54 + hNUP58/45 <br />

**[[3t97]] – rNUP54 + NUP62 - rat<br />

**[[5c3l]] – fNUP54 coiled coil + NUP58 coiled coil + NUP62 coiled coil + nanobody - frog<br />

**[[5c2u]] – fNUP54 ferredoxin-like domain + nanobody <br />

*NUP57

**[[5cwt]] – CtNUP57 residues 265-317<br />

**[[5cws]] – CtNUP57 residues 74-319 + NUP49 + NIC96 + antibody<br />

*NUP58

**[[4jq5]] – hNUP58/45 <br />

**[[2osz]] – rNUP58/45 <br />

*NUP62

**[[5h1x]] – rNUP62 coiled-coil domain<br />

*NUP82

**[[3pbp]] – yNUP82 NTD + NUP116 CTD + NUP159 CTD<br />

**[[3tkn]] - yNUP82 NTD + NUP98 + NUP159 CTD<br />

**[[5cww]] – CtNUP82 + CtNUP145 CTD peptide + Ct159 CTD peptide<br />

*NUP84

**[[3jro]], [[3iko]] – yNUP84+NUP145+protein Sec13<br />

**[[4xmm]] - yNUP84+NUP85+NUP120+NUP145+protein Seh1 + antibody<br />

**[[4xmn]] - yNUP84+NUP85+NUP120+NUP145 + antibody<br />

**[[6x02]], [[6x03]] – yNUP84 + NUP133 + nanobody<br />

*NUP85

**[[3f3f]], [[3f3g]], [[3f3p]], [[3ewe]] – yNUP85+Seh1<br />

**[[6x08]] - yNUP85+Seh1 + nanobody<br />

*NUP88

**[[7mni]] – hNUP88 NTD 1-493 + NUP98 715-863<br />

**[[7mw0]] – hNUP93 174-819<br />

**[[7mw1]] – hNUP93 174-819 + NUP53 84-150<br />

*NUP96

**[[7nqa]] – fNUP96 + nanobody<br />

*NUP98

**[[3mmy]] – hNUP98 fragment+mRNA export factor <br />

**[[1ko6]], [[2q5x]], [[2q5y]] – hNUP98 CTD<br />

**[[7now]] – fNUP98 + nanobody<br />

**[[7nq6]] – fNUP98 CTD <br />

*NUP100

**[[3nf5]] – NUP100 CTD – ''Candida glabrata''<br />

*NUP107

**[[3i4r]], [[3cqc]], [[3cqg]] – hNUP107+NUP133<br />

*NUP116

**[[2aiv]] – yNUP116 CTD - NMR<br />

*NUP120

**[[3f7f]], [[3h7n]], [[3hxr]] – yNUP120<br />

**[[6x06]] – yNUP120 + nanobody<br />

*NUP133

**[[1xks]], [[4q9t]] – hNUP133 NTD<br />

**[[3kfo]] – yNUP133 CTD <br />

**[[6x04]], [[6x05]] – yNUP133 + nanobody<br />

*NUP145

**[[3bg0]], [[3bg1]] – hNUP145+Sec13-related protein<br />

**[[3kep]], [[3kes]] – yNUP145 autoproteolytic domain<br />

**[[5hb5]] – CtNUP145 <br />

**[[5hb6]] – CtNUP145 (mutant)<br />

*NUP152

**[[5tvz]] – yNUP152 Ig-like repeats - NMR<br />

*NUP153

**[[7mo1]] – hNUP153 zinc finger 1 648-687 +RAN<br />

**[[3gj3]], [[3gj4]], [[3gj5]], [[3gj6]], [[3gj7]], [[3gj8]], [[3ch5]], [[7mo3]], [[7mo4]] – hNUP153 zinc finger 2 723-750 +RAN <br />

**[[7eye]] – NUP155 19-863 – RVSV – Cryo EM<br />

**[[7eyq]] – NUP155 19-1069 – RVSV – Cryo EM<br />

*NUP157

**[[4mhc]] – hNUP157 NTD<br />

*NUP159

**[[1xip]] – yNUP159 NTD<br />

**[[3rrm]] – yNUP159  residues 2-387 + NUP Gle1 + IP6 + ADP<br />

*NUP170

**[[3i5p]], [[3i5q]] – yNUP170<br />

**[[5hb1]] – CtNUP170 <br />

**[[5hb0]] – CtNUP170 (mutant) + CtNUP145 peptide<br />

**[[5hax]] – CtNUP170 NTD + CtNUP53 peptide<br />

*NUP188

**[[47wo9]] – yNUP188 – Cryo EM<br />

**[[5cwu]] – CtNUP188 tail domain<br />

*NUP192

**[[4ifq]] – yNUP192<br />

**[[5hb4]] – CtNUP192 <br />

**[[7mvt]] – CtNUP192 185-1756 + Nic96 <br />

**[[5cwv]] – CtNUP192 tail domain<br />

*NUP214

**[[3fmo]], [[3fmp]], [[3fhc]] – hNUP214+dead-box helicase<br />

**[[2oit]] – hNUP214 NTD<br />

*NUP358

**[[1z5s]] – hNUP358 IR1 domain+ubiquitin-conjugating enzyme+SMT3C+RAN CTD<br />

**[[1xke]] - hNUP358 RANBD - NMR<br />

*NUP1P

**[[5owu]] – NUP1P+Kap95 complex<br />

*NUP2P

**[[1un0]] – yNUP2P NTD+imporrin α subunit<br />

*NUP-NSP1

**[[1o6o]] – yNUP-NSP1 residues 497-608+importrin β subunit<br />

*NUP-CDC31

**[[2doq]], [[2gv5]] – yNUP-CDC31+SFI1P<br />

**[[3fwb]], [[3fwc]] - yNUP-CDC31+SAC3<br />

*NUP Gle1

**[[3peu]], [[3pev]], [[3rrn]]– yNUP-Gle1 + ATP-dependent RNA helicase Dbp5 (mutant) +IP6<br />

**[[6b4e]] – yNUP-Gle1 + NUP42 <br />

**[[6b4g]], [[6b4h]] – CtNUP-Gle1 + NUP Amo1 <br />

*NUP-Nic96

**[[2rfo]], [[2qx5]] – yNic96<br />

**[[6x07]] – yNic96 + nanobody<br />