Cadherin 3D structures: Difference between revisions

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*CDH1 encoded by CDH1

**[[6cxy]] – hCDH1 + antibody - human<br />

**[[8h62]] – hCDH1 EC12 + internalin A<br />

* CDH5  

**[[2koh]] – mCDH5+PAR3-PDZ3 - mouse<br />

* CDH6  

**[[3lnd]] – mCDH6 EC12 (mutant)<br />

*CDH encoded by CDH7

**[[6cgs]] – mCDH7 EC1-EC2<br />

* CDH8  

**[[1zxk]] – mCDH8 EC1<br />

**[[2a62]] - mCDH8 EC1-EC3<br />

* CDH11  

**[[2a4c]], [[2a4e]] – mCDH11 EC1<br />

**[[6cgb]] - mCDH11 EC1/CDH6 EC2<br />

*CDH encoded by CDH17

**[[6ulm]], [[7ev1]] – hCDH17 EC1-EC2<br />

**[[7cym]] – hCDH17 EC1-EC4<br />

* CDH20  

**[[1zvn]] – cCDH20 EC1 – chicken<br />

*CDH encoded by CDH22

**[[6cg7]] – mCDH20 EC1-EC2<br />

* CDH23  

**[[2kbr]] – hCDH23 peptide+harmonin – NMR <br />

**[[2kbs]] - hCDH23 C-terminal peptide+harmonin PDZ2 – NMR<br />

**[[5w4t]] - CDH23 EC1-EC3 - zebrafish<br />

**[[8e51]] – CDH23 EC1-EC2 + Prot-CDH15 EC1-EC2 - catfish<br />

* C-CDH “classical”  

**[[1l3w]] – XlC-CDH ectodomain - ''Xenopus laevis''<br />

**[[1q5b]], [[1q5c]], [[1q55]], [[1q5a]] – C-CDH model into desmosome – electron tomography<br />

**[[7tni]] - CDH23 EC12 (mutant) – tobacco moth<br />

* E-CDH epithelial or CDH1

**[[4zt1]], [[2o72]] – hE-CDH EC1-EC2<br />

**[[4zte]] – hE-CDH EC1-EC2 + inhibitor<br />

**[[4qd2]] – mE-CDH + botulinum neurotoxin<br />

**[[1o6s]] – E-CDH N-terminal+internalin – ''Listeria monocytogenes''<br />

*K-CDH kidney or CDH6

**[[5veb]] – hK-CDH EC5 + antibody<br />

**[[6cgu]] – mK-CDH EC1-EC2 <br />

* T-CDH membrane bound  

**[[2v37]] – hT-CDH N-terminal - NMR<br />

**[[3k5r]], [[6cg6]] – mT-CDH EC1-EC2<br />

**[[3k6i]] - cT-CDH EC1<br />

**[[3k6d]] - XlT-CDH EC1 <br />

* N-CDH neuronal  

**[[1nch]], [[1nci]] – mN-CDH<br />

**[[1ncg]] – mN-CDH (mutant)<br />

**[[3ubh]] - DmN-CDH EC1-EC4<br />

**[[3ubg]] - DmN-CDH EC1-EC3

*P-CDH placental or CDH3

**[[4oy9]], [[4zml]], [[4zmn]], [[4zmq]], [[4zmt]], [[4zmw]], [[4zmz]], [[6ztb]] – hP-CDH EC1-EC2 residues 108-324<br />

**[[4zmo]], [[4zmp]], [[4zmv]], [[4zmx]], [[4zmy]] – hP-CDH EC1-EC2 (mutant)<br />

**[[7cme]], [[7cmf]], [[8hyi]] – hP-CDH EC1-EC2 + inhibitor<br />

**[[4nqq]] – mP-CDH EC1-EC2<br />

*VE-CDH vascular epithelial

**[[3ppe]] – cVE-CDH EC1+EC2<br />

* Protocadherin  

**[[6bx7]], [[6mga]], [[6vfp]] - hProt-CDH1 EC1-EC4<br />

**[[2yst]] – hProt-CDH7 EC3 – NMR<br />

**[[6vg1]] - Prot-CDH 8.1 EC1-EC6 - frog<br />

**[[6pgw]] - zProt-CDH19 EC3-EC6 <br />

* Desmoglein  

**[[2yqg]] – hDes-2 EC1 47-162<br />

**[[5erd]] – hDes-2 ectodomain 50-602<br />

**[[7agf]], [[7agg]] – hDes-2 EC2-EC3 + adenovirus fiber protein – Cryo EM<br />

**[[7a7d]] – hDes-2 + desmocollin-2 – Cryo EM<br />

*Desmocollin

**[[5iry]] – hDesmc1 ectodomain<br />

**[[5erp]] – hDesmc2 EC2-EC5<br />