Clp Protease 3D structures: Difference between revisions

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*Clp P subunit or ATP-dependent Clp protease proteolytic subunit

**[[1tg6]], [[8w7c]] - hClpP – human<br />

**[[1tyf]], [[1yg6]] – EcClpP  – ''Escherichia coli''<br />

**[[7dft]] – XoClpP – ''Xanthomonas oryzae''<br />

**[[8xn4]] – ShClpP (mutant) – ''Streptomyces hawaiiensis'' – Cryo EM<br />

*Clp P subunit binary complex

**[[6h23]] - hClpP (mutant) + carboxamide derivative<br />

**[[6dl7]], [[6nb1]], [[7uvm]], [[7uvn]], [[7uvr]], [[7uvu]], [[7vp9]], [[7wh5]], [[8i7x]], [[8wuz]], [[8ylb]] - hClpP + pyrimidine derivative<br />

**[[6hwn]] – ClpP + tripeptide – ''Thermus thermophilus''<br />

**[[8xop]] – ShClpP (mutant) + ADEP-1 – Cryo EM<br />

*Clp P subunit higher complexes

**[[4u0g]] – MtClpP1 + ClpP2 + ADEP + agonist<br />

**[[6emw]] – SaClpP in MECA complex – Cryo EM <br />

**[[8xon]], [[8xoo]] – ShClpP (mutant) + casein + ketoreductase – Cryo EM<br />

**[[7eko]], [[7ekq]] – ClpP in chloroplast complex – ''Chlamydomonas reinhardtii'' – Cryo EM <br />

*Clp C

**[[8xqu]] – hClpC1 N terminal <br />

**[[5gui]] – AtClpC1 N terminal – ''Arabidopsis thaliana'' <br />

**[[6em8]], [[6em9]] - SaClp – Cryo EM<br />

**[[8p66]] - PaClpC - NMR<br />

*Clp S or ATP-dependent Clp protease adapter protein ClpS

**[[7d34]] – AtClpS1 + dipeptide<br />

**[[9ayn]], [[9ayp]], [[9az5]] - MsClp <br />

**[[9b06]] - MsClp + Thr<br />

**[[9ayo]], [[9b10]], [[9b1p]] - MsClp + dipeptide<br />

*Clp X or ATP-dependent Clp protease ATP-binding subunit ClpXP

**[[6pba]] - MtClp N-terminal domain<br />

**[[3hte]], [[4i34]], [[4i5o]], [[4i63]], [[4i9k]] - EcClp <br />

**[[6lsy]] - SpClp - Cryo EM<br />

**[[6lt4]] - SpClp + ATPgS – Cryo EM<br />

*ClpP+ClpX

**[[6ppe]], [[6wr2]], [[8e7v]] – EcClpP + ClpX – Cryo EM<br />

**[[6po1]], [[6wsg]] – EcClpP + ClpX + ATP-gS – Cryo EM<br />

**[[6vfs]], [[6vfx]] – NmClpP + ClpX + peptide + ADP + ATP – Cryo EM<br />

**[[6vxf]] - NmClpP + ClpX + ADP + ATP – Cryo EM<br />

*ClpP+ClpA

**[[6uqe]], [[6uqo]], [[6w1z]], [[6w20]], [[6w21]], [[6w23]] – EcClpP + ClpA + RepA + ADP + ATP – Cryo EM<br />

*ClpP+ClpA+ClpS

**[[7uiv]], [[7uiw]], [[7uix]], [[7uiy]], [[7uiz]], [[7uj0]] – EcClpP + ClpA + ClpS + ADP + ATP-gS – Cryo EM<br />

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