9dpg: Difference between revisions

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'''Unreleased structure'''


The entry 9dpg is ON HOLD  until Paper Publication
==Structure of PmHMGR bound to mevalonate, CoA and NAD 2 minutes 20 seconds after reaction initiation at pH 9==
 
<StructureSection load='9dpg' size='340' side='right'caption='[[9dpg]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
Authors: Purohit, V., Steussy, C.N., Schmidt, T., Stauffacher, C.V., Rushton, P.
== Structural highlights ==
 
<table><tr><td colspan='2'>[[9dpg]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_mevalonii Pseudomonas mevalonii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9DPG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9DPG FirstGlance]. <br>
Description: Structure of PmHMGR bound to mevalonate, CoA and NAD 2 minutes 20 seconds after reaction initiation at pH 9
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
[[Category: Unreleased Structures]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=A1AFY:(3~{R})-3-methyl-3-oxidanyl-5-oxidanylidene-pentanoic+acid'>A1AFY</scene>, <scene name='pdbligand=COA:COENZYME+A'>COA</scene>, <scene name='pdbligand=MEV:(R)-MEVALONATE'>MEV</scene>, <scene name='pdbligand=NAI:1,4-DIHYDRONICOTINAMIDE+ADENINE+DINUCLEOTIDE'>NAI</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZKE:(3~{S},5~{R})-5-[2-[3-[[(2~{R})-4-[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethylsulfanyl]-3-methyl-3,5-bis(oxidanyl)pentanoic+acid'>ZKE</scene></td></tr>
[[Category: Steussy, C.N]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9dpg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9dpg OCA], [https://pdbe.org/9dpg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9dpg RCSB], [https://www.ebi.ac.uk/pdbsum/9dpg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9dpg ProSAT]</span></td></tr>
[[Category: Rushton, P]]
</table>
[[Category: Purohit, V]]
== Function ==
[[Category: Schmidt, T]]
[https://www.uniprot.org/uniprot/MVAA_PSEMV MVAA_PSEMV] P.mevalonii can use mevalonate as sole carbon source. With this enzyme mevalonate is deacetylated to HMG-CoA.
[[Category: Stauffacher, C.V]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Pseudomonas mevalonii]]
[[Category: Purohit V]]
[[Category: Rushton P]]
[[Category: Schmidt T]]
[[Category: Stauffacher CV]]
[[Category: Steussy CN]]
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