9o4s: Difference between revisions

Line 1:

~~'''Unreleased structure'''~~

~~The entry~~ 9o4s is ~~ON HOLD~~

==RT XFEL structure of Soybean Lipoxygenase-1 in small unit-cell==

~~Authors~~:

== Structural highlights ==

<table><tr><td colspan='2'>[[9o4s]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Glycine_max Glycine max]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9O4S OCA]. For a guided tour on the structure components use [https://proteopedia.org/fgij/fg.htm?mol=9O4S FirstGlance].

~~Description~~:

</td></tr><tr id='method'><td class="sblockLbl">[[Empirical_models|Method:]]</td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95Å</td></tr>

[[Category: ~~Unreleased~~ Structures]]

<tr id='ligand'><td class="sblockLbl">[[Ligand|Ligands:]]</td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>

<tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[https://proteopedia.org/fgij/fg.htm?mol=9o4s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9o4s OCA], [https://pdbe.org/9o4s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9o4s RCSB], [https://www.ebi.ac.uk/pdbsum/9o4s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9o4s ProSAT]</td></tr>

</table>

== Function ==

[https://www.uniprot.org/uniprot/LOX1_SOYBN LOX1_SOYBN] Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. With linoleate as substrate, L-1 shows a preference for carbon 13 as the site for hydroperoxidation (in contrast to L-2 and L-3, which utilize either carbon 9 or 13). At pH above 8.5, only (9Z,11E,13S)-13-hydroperoxyoctadeca-9,11-dienoate is produced, but as the pH decreases, the proportion of (9S)-hydroperoxide increases linearly until at pH 6.0 it represents about 25 % of the products.<ref>PMID:16157595</ref>

== References ==

__TOC__

</StructureSection>

[[Category: Glycine max]]

[[Category: Large Structures]]

[[Category: Thompson MC]]

[[Category: Wolff AM]]

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@@ Line 1: / Line 1: @@
-'''Unreleased structure'''
-The entry 9o4s is ON HOLD
+==RT XFEL structure of Soybean Lipoxygenase-1 in small unit-cell==
+<StructureSection load='9o4s' size='340' side='right'caption='[[9o4s]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
-Authors:
+== Structural highlights ==
+<table><tr><td colspan='2'>[[9o4s]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Glycine_max Glycine max]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9O4S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9O4S FirstGlance]. <br>
-Description:
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-[[Category: Unreleased Structures]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9o4s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9o4s OCA], [https://pdbe.org/9o4s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9o4s RCSB], [https://www.ebi.ac.uk/pdbsum/9o4s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9o4s ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/LOX1_SOYBN LOX1_SOYBN] Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. With linoleate as substrate, L-1 shows a preference for carbon 13 as the site for hydroperoxidation (in contrast to L-2 and L-3, which utilize either carbon 9 or 13). At pH above 8.5, only (9Z,11E,13S)-13-hydroperoxyoctadeca-9,11-dienoate is produced, but as the pH decreases, the proportion of (9S)-hydroperoxide increases linearly until at pH 6.0 it represents about 25 % of the products.<ref>PMID:16157595</ref>
+== References ==
+<references/>
+__TOC__
+</StructureSection>
+[[Category: Glycine max]]
+[[Category: Large Structures]]
+[[Category: Thompson MC]]
+[[Category: Wolff AM]]