9om5: Difference between revisions
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==Composite map of six VRC35 Fabs and three MEDI8852 Fabs bound to influenza H3N2 Victoria 2011 hemagglutinin== | |||
<StructureSection load='9om5' size='340' side='right'caption='[[9om5]], [[Resolution|resolution]] 3.40Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[9om5]] is a 24 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Influenza_A_virus Influenza A virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9OM5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9OM5 FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.4Å</td></tr> | |||
[[Category: | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr> | ||
[[Category: | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9om5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9om5 OCA], [https://pdbe.org/9om5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9om5 RCSB], [https://www.ebi.ac.uk/pdbsum/9om5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9om5 ProSAT]</span></td></tr> | ||
[[Category: | </table> | ||
[[Category: | == Function == | ||
[[Category: | [https://www.uniprot.org/uniprot/A0A5P1MU07_9INFA A0A5P1MU07_9INFA] Binds to sialic acid-containing receptors on the cell surface, bringing about the attachment of the virus particle to the cell. This attachment induces virion internalization either through clathrin-dependent endocytosis or through clathrin- and caveolin-independent pathway. Plays a major role in the determination of host range restriction and virulence. Class I viral fusion protein. Responsible for penetration of the virus into the cell cytoplasm by mediating the fusion of the membrane of the endocytosed virus particle with the endosomal membrane. Low pH in endosomes induces an irreversible conformational change in HA2, releasing the fusion hydrophobic peptide. Several trimers are required to form a competent fusion pore.[HAMAP-Rule:MF_04072] Binds to sialic acid-containing receptors on the cell surface, bringing about the attachment of the virus particle to the cell. This attachment induces virion internalization of about two third of the virus particles through clathrin-dependent endocytosis and about one third through a clathrin- and caveolin-independent pathway. Plays a major role in the determination of host range restriction and virulence. Class I viral fusion protein. Responsible for penetration of the virus into the cell cytoplasm by mediating the fusion of the membrane of the endocytosed virus particle with the endosomal membrane. Low pH in endosomes induces an irreversible conformational change in HA2, releasing the fusion hydrophobic peptide. Several trimers are required to form a competent fusion pore.[RuleBase:RU003324] | ||
[[Category: | __TOC__ | ||
[[Category: | </StructureSection> | ||
[[Category: | [[Category: Homo sapiens]] | ||
[[Category: | [[Category: Influenza A virus]] | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: | [[Category: Becker JE]] | ||
[[Category: | [[Category: Cale EM]] | ||
[[Category: | [[Category: Cheng J]] | ||
[[Category: | [[Category: Doria-Rose NA]] | ||
[[Category: | [[Category: Du H]] | ||
[[Category: | [[Category: Huang R]] | ||
[[Category: | [[Category: Kwong PD]] | ||
[[Category: | [[Category: Lang ZC]] | ||
[[Category: | [[Category: Lei H]] | ||
[[Category: | [[Category: Li N]] | ||
[[Category: | [[Category: Longo N]] | ||
[[Category: | [[Category: Morano NC]] | ||
[[Category: Morton AJ]] | |||
[[Category: Pierson TC]] | |||
[[Category: Roark RS]] | |||
[[Category: Rubin S]] | |||
[[Category: Shapiro L]] | |||
[[Category: Sutton MS]] | |||
[[Category: Tsybovsky Y]] | |||
[[Category: Zhang B]] | |||
[[Category: Zhou T]] | |||
Latest revision as of 04:53, 27 May 2026
Composite map of six VRC35 Fabs and three MEDI8852 Fabs bound to influenza H3N2 Victoria 2011 hemagglutinin
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