9m5a: Difference between revisions

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'''Unreleased structure'''


The entry 9m5a is ON HOLD
==cryo-EM structure of PSII D1-V185T from Thermosynechococcus vestitus BP-1==
 
<StructureSection load='9m5a' size='340' side='right'caption='[[9m5a]], [[Resolution|resolution]] 1.88&Aring;' scene=''>
Authors: Jiang, H.W., Nakajima, Y., Akita, F., Li, H.J., Kato, K., Sugiura, M., Shen, J.R.
== Structural highlights ==
 
<table><tr><td colspan='2'>[[9m5a]] is a 20 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermosynechococcus_vestitus_BP-1 Thermosynechococcus vestitus BP-1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9M5A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9M5A FirstGlance]. <br>
Description: cryo-EM structure of PSII D1-V185T from Thermosynechococcus vestitus BP-1
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 1.88&#8491;</td></tr>
[[Category: Unreleased Structures]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BCR:BETA-CAROTENE'>BCR</scene>, <scene name='pdbligand=BCT:BICARBONATE+ION'>BCT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CLA:CHLOROPHYLL+A'>CLA</scene>, <scene name='pdbligand=DGD:DIGALACTOSYL+DIACYL+GLYCEROL+(DGDG)'>DGD</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=FME:N-FORMYLMETHIONINE'>FME</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=LHG:1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE'>LHG</scene>, <scene name='pdbligand=LMG:1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE'>LMG</scene>, <scene name='pdbligand=LMT:DODECYL-BETA-D-MALTOSIDE'>LMT</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PHO:PHEOPHYTIN+A'>PHO</scene>, <scene name='pdbligand=PL9:2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE'>PL9</scene>, <scene name='pdbligand=RRX:(3R)-BETA,BETA-CAROTEN-3-OL'>RRX</scene>, <scene name='pdbligand=SQD:1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL'>SQD</scene></td></tr>
[[Category: Nakajima, Y]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9m5a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9m5a OCA], [https://pdbe.org/9m5a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9m5a RCSB], [https://www.ebi.ac.uk/pdbsum/9m5a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9m5a ProSAT]</span></td></tr>
[[Category: Shen, J.R]]
</table>
[[Category: Akita, F]]
== Function ==
[[Category: Kato, K]]
[https://www.uniprot.org/uniprot/PSBA3_THEVB PSBA3_THEVB] Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbD) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.[HAMAP-Rule:MF_01379]<ref>PMID:19219048</ref>
[[Category: Li, H.J]]
== References ==
[[Category: Sugiura, M]]
<references/>
[[Category: Jiang, H.W]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermosynechococcus vestitus BP-1]]
[[Category: Akita F]]
[[Category: Jiang HW]]
[[Category: Kato K]]
[[Category: Li HJ]]
[[Category: Nakajima Y]]
[[Category: Shen JR]]
[[Category: Sugiura M]]
Retrieved from "https://proteopedia.org/9m5a"