Pre-mRNA splicing factors 3D structures: Difference between revisions

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Michal Harel (talk | contribs)
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Line 37: Line 37:
**[[2p87]] – CePrp C terminal <br />
**[[2p87]] – CePrp C terminal <br />
**[[6nqi]] – Prp RH domain – red alga <br />
**[[6nqi]] – Prp RH domain – red alga <br />
**[[9dtr]] – yPrp in spliceosome – Cryo EM<br />
**[[6teo]] – yPrp residues 315-555 + yPro SNU114 <br />
**[[6teo]] – yPrp residues 315-555 + yPro SNU114 <br />
**[[3sbt]], [[4ilh]] – yPrp RNAse H like domain 1835-2096 + A1 cistron-splicing factor AAR2 <br />
**[[3sbt]], [[4ilh]] – yPrp RNAse H like domain 1835-2096 + A1 cistron-splicing factor AAR2 <br />
Line 66: Line 67:
*Pre-mRNA-splicing factor 19
*Pre-mRNA-splicing factor 19


**[[8ro2]] – hPrp in spliceosome – Cryo EM<br />
**[[3lrv]] – yPrp WD40 domain<BR />
**[[3lrv]] – yPrp WD40 domain<BR />
**[[2bay]] – yPrp U-box<BR />
**[[2bay]] – yPrp U-box<BR />
**[[1n87]] - yPrp U-box - NMR<BR />
**[[1n87]] - yPrp U-box - NMR<BR />
**[[8xi2]] – Prp in spliceosome – ''Chlamydomonas reinhardtii'' - Cryo EM<br />
**[[9l5r]], [[9l5s]], [[9l5t]] – Prp in spliceosome – ''Thermochaetoides thermophila'' - Cryo EM<br />


*Pre-mRNA-splicing factor 20
*Pre-mRNA-splicing factor 20
Line 95: Line 100:
**[[4rz9]], [[4rza]] – hPrp <br />
**[[4rz9]], [[4rza]] – hPrp <br />
**[[5f5s]] – hPrp + microfibrillar-associated protein 1<br />
**[[5f5s]] – hPrp + microfibrillar-associated protein 1<br />
**[[8h6k]], [[8h6l]], [[8qo9]], [[8qpe]], [[8y7e]], [[9k1r]], [[9r3d]] – hPrp in spliceosome – Cryo EM<br />


*Pre-mRNA-splicing factor 40
*Pre-mRNA-splicing factor 40
Line 104: Line 110:
*Pre-mRNA-splicing factor 43P or Pre-mRNA-splicing factor ATP-dependent RNA helicase Prp43
*Pre-mRNA-splicing factor 43P or Pre-mRNA-splicing factor ATP-dependent RNA helicase Prp43


**[[8rdy]] – hPrp+ Pxr1 – Cryo EM<br />
**[[2xau]], [[3kx2]] – yPrp + ADP<br />
**[[2xau]], [[3kx2]] – yPrp + ADP<br />
**[[5jpt]] – yPrp + CDP<br />
**[[5jpt]] – yPrp + CDP<br />
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**[[6yvh]] – hPrp + cwc27 + EIF-4A<br />
**[[6yvh]] – hPrp + cwc27 + EIF-4A<br />
**[[4c9b]] – yPrp 116-406 + EIF-4A<br />
**[[4c9b]] – yPrp 116-406 + EIF-4A<br />
**[[9fmd]] – yPrp in spliceosome – Cryo EM<br />


*Pre-mRNA-splicing factor cwc26
*Pre-mRNA-splicing factor cwc26
Line 130: Line 138:
**[[2mkc]] – yPrp + U2 SNRNP component IST3 + Pre-mRNA leakage protein<br />
**[[2mkc]] – yPrp + U2 SNRNP component IST3 + Pre-mRNA leakage protein<br />
**[[4uqt]] – yPrp + U2 SNRNP component IST3 <br />
**[[4uqt]] – yPrp + U2 SNRNP component IST3 <br />
*Pre-mRNA-splicing factor cwf
**[[9esh]], [[9esi]] – Prp in spliceosome – fission yeast – Cryo EM<br />


*Pre-mRNA-splicing factor bud31
*Pre-mRNA-splicing factor bud31
Line 146: Line 159:
*Pre-mRNA-splicing factor RBM22
*Pre-mRNA-splicing factor RBM22


**[[8i0p]], [[8i0r]], [[8i0s]], [[8i0t]], [[8i0u]], [[8i0v]], [[8i0w]], [[8ro0]], [[8ro1]] – hPrp in spliceosome – Cryo EM<br />
**[[2ytc]] – yPrp RNA-binding domain - NMR<BR />
**[[2ytc]] – yPrp RNA-binding domain - NMR<BR />