9s05: Difference between revisions
From Proteopedia
Jump to navigationJump to search
m Protected "9s05" [edit=sysop:move=sysop] |
No edit summary |
||
| Line 1: | Line 1: | ||
==Focused refinement of open encapsulin pentamer from symmetry expansion of icosahedral single particle reconstruction of the Rhodospirillum rubrum encapsulin:encapsulated ferritin complex== | |||
<StructureSection load='9s05' size='340' side='right'caption='[[9s05]], [[Resolution|resolution]] 2.68Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[9s05]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodospirillum_rubrum Rhodospirillum rubrum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9S05 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9S05 FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.68Å</td></tr> | |||
[[Category: | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9s05 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9s05 OCA], [https://pdbe.org/9s05 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9s05 RCSB], [https://www.ebi.ac.uk/pdbsum/9s05 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9s05 ProSAT]</span></td></tr> | ||
[[Category: | </table> | ||
[[Category: | == Function == | ||
[[Category: | [https://www.uniprot.org/uniprot/FER_RHORT FER_RHORT] Cargo protein of a type 1 encapsulin nanocompartment. A ferritin-like ferroxidase that mineralizes iron inside the encapsulin nanocompartment. Converts Fe(2+) to Fe(3+) that is released to the exterior of the decameric complex for deposition in the encapsulin nanocompartment. In solution the decamer binds 10-15 iron cations; in the encapsulin nanocompartment the decamer can bind up to 48 ions, perhaps via its internal channel and on its exterior. The empty encapsulin nanocompartment sequesters about 2200 Fe ions while the cargo-loaded nanocompartment can maximally sequester about 4150 Fe ions. EncFtn retains ferroxidase activity when encapsulated (PubMed:27529188). Flux in the active site di-iron metal center is thought to be controlled by the 'entry site' of the protein, which both attracts metal and controls the rate of iron oxidation (Probable). Encapsulation in the nanocompartment does not alter either function of this protein (PubMed:32878987).<ref>PMID:27529188</ref> <ref>PMID:32878987</ref> <ref>PMID:32878987</ref> | ||
[[Category: | == References == | ||
<references/> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Large Structures]] | |||
[[Category: Rhodospirillum rubrum]] | |||
[[Category: Basle A]] | |||
[[Category: Marles-Wright J]] | |||
[[Category: McCorvie TJ]] | |||
[[Category: McIver Z]] | |||
Latest revision as of 20:17, 29 July 2026
Focused refinement of open encapsulin pentamer from symmetry expansion of icosahedral single particle reconstruction of the Rhodospirillum rubrum encapsulin:encapsulated ferritin complex
| ||||||||||||
