9ztj: Difference between revisions

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'''Unreleased structure'''


The entry 9ztj is ON HOLD
==CryoEM structure of H5N1 A/Texas/37/2024 HA bound to Fab H91==
 
<StructureSection load='9ztj' size='340' side='right'caption='[[9ztj]], [[Resolution|resolution]] 3.08&Aring;' scene=''>
Authors: Morano, N.C., Ho, D.D., Shapiro, L., Kwong, P.D.
== Structural highlights ==
 
<table><tr><td colspan='2'>[[9ztj]] is a 9 chain structure with sequence from [https://en.wikipedia.org/wiki/Influenza_A_virus Influenza A virus] and [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9ZTJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9ZTJ FirstGlance]. <br>
Description: CryoEM structure of H5N1 A/Texas/37/2024 HA bound to Fab H91
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.08&#8491;</td></tr>
[[Category: Unreleased Structures]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SIA:O-SIALIC+ACID'>SIA</scene></td></tr>
[[Category: Kwong, P.D]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9ztj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9ztj OCA], [https://pdbe.org/9ztj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9ztj RCSB], [https://www.ebi.ac.uk/pdbsum/9ztj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9ztj ProSAT]</span></td></tr>
[[Category: Ho, D.D]]
</table>
[[Category: Shapiro, L]]
== Function ==
[[Category: Morano, N.C]]
[https://www.uniprot.org/uniprot/A0AAX6NNG0_9INFA A0AAX6NNG0_9INFA] Binds to sialic acid-containing receptors on the cell surface, bringing about the attachment of the virus particle to the cell. This attachment induces virion internalization either through clathrin-dependent endocytosis or through clathrin- and caveolin-independent pathway. Plays a major role in the determination of host range restriction and virulence. Class I viral fusion protein. Responsible for penetration of the virus into the cell cytoplasm by mediating the fusion of the membrane of the endocytosed virus particle with the endosomal membrane. Low pH in endosomes induces an irreversible conformational change in HA2, releasing the fusion hydrophobic peptide. Several trimers are required to form a competent fusion pore.[HAMAP-Rule:MF_04072]  Binds to sialic acid-containing receptors on the cell surface, bringing about the attachment of the virus particle to the cell. This attachment induces virion internalization of about two third of the virus particles through clathrin-dependent endocytosis and about one third through a clathrin- and caveolin-independent pathway. Plays a major role in the determination of host range restriction and virulence. Class I viral fusion protein. Responsible for penetration of the virus into the cell cytoplasm by mediating the fusion of the membrane of the endocytosed virus particle with the endosomal membrane. Low pH in endosomes induces an irreversible conformational change in HA2, releasing the fusion hydrophobic peptide. Several trimers are required to form a competent fusion pore.[RuleBase:RU003324]
__TOC__
</StructureSection>
[[Category: Influenza A virus]]
[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Ho DD]]
[[Category: Kwong PD]]
[[Category: Morano NC]]
[[Category: Shapiro L]]
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