9sim: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
 
Line 1: Line 1:
'''Unreleased structure'''


The entry 9sim is ON HOLD  until Paper Publication
==Phage epsilon15 tailspike gp20 containing domains beta-helix, beta-sandwich and petal domains==
 
<StructureSection load='9sim' size='340' side='right'caption='[[9sim]], [[Resolution|resolution]] 1.94&Aring;' scene=''>
Authors: Seoane-Blanco, M., van Raaij, M.J.
== Structural highlights ==
 
<table><tr><td colspan='2'>[[9sim]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_phage_epsilon15 Salmonella phage epsilon15]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9SIM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9SIM FirstGlance]. <br>
Description: Phage epsilon15 tailspike gp20 containing domains beta-helix, beta-sandwich and petal domains
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.94&#8491;</td></tr>
[[Category: Unreleased Structures]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
[[Category: Seoane-Blanco, M]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9sim FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9sim OCA], [https://pdbe.org/9sim PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9sim RCSB], [https://www.ebi.ac.uk/pdbsum/9sim PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9sim ProSAT]</span></td></tr>
[[Category: Van Raaij, M.J]]
</table>
== Function ==
[https://www.uniprot.org/uniprot/FIBER_BPE15 FIBER_BPE15] Structural component of the short non-contractile tail (PubMed:16452981). The tail comprises six spikes that mediate primary attachment to the host cell lipopolysaccharides (LPS) and display endorhamnosidase enzymatic activity, hydrolyzing the linkage between rhamnose and galactose of the O-antigen polysaccharide. Digestion of the LPS brings the capsid near the cell outer membrane (PubMed:20709082, PubMed:4633001).<ref>PMID:16452981</ref> <ref>PMID:20709082</ref> <ref>PMID:4633001</ref>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Salmonella phage epsilon15]]
[[Category: Seoane-Blanco M]]
[[Category: Van Raaij MJ]]
Retrieved from "https://proteopedia.org/9sim"