2gdi: Difference between revisions

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[[Image:2gdi.gif|left|200px]]
[[Image:2gdi.gif|left|200px]]


{{Structure
<!--
|PDB= 2gdi |SIZE=350|CAPTION= <scene name='initialview01'>2gdi</scene>, resolution 2.05&Aring;
The line below this paragraph, containing "STRUCTURE_2gdi", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)
|LIGAND= <scene name='pdbligand=A:ADENOSINE-5&#39;-MONOPHOSPHATE'>A</scene>, <scene name='pdbligand=C:CYTIDINE-5&#39;-MONOPHOSPHATE'>C</scene>, <scene name='pdbligand=CCC:CYTIDINE-5&#39;-PHOSPHATE-2&#39;,3&#39;-CYCLIC+PHOSPHATE'>CCC</scene>, <scene name='pdbligand=G:GUANOSINE-5&#39;-MONOPHOSPHATE'>G</scene>, <scene name='pdbligand=GTP:GUANOSINE-5&#39;-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=TPP:THIAMINE+DIPHOSPHATE'>TPP</scene>, <scene name='pdbligand=U:URIDINE-5&#39;-MONOPHOSPHATE'>U</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY=  
or leave the SCENE parameter empty for the default display.
|GENE=  
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|DOMAIN=
{{STRUCTURE_2gdi| PDB=2gdi  | SCENE= }}  
|RELATEDENTRY=
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gdi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gdi OCA], [http://www.ebi.ac.uk/pdbsum/2gdi PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2gdi RCSB]</span>
}}


'''Crystal structure of thiamine pyrophosphate-specific riboswitch in complex with thiamine pyrophosphate'''
'''Crystal structure of thiamine pyrophosphate-specific riboswitch in complex with thiamine pyrophosphate'''
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==About this Structure==
==About this Structure==
2GDI is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/ ]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GDI OCA].  
Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GDI OCA].  


==Reference==
==Reference==
Structural basis for gene regulation by a thiamine pyrophosphate-sensing riboswitch., Serganov A, Polonskaia A, Phan AT, Breaker RR, Patel DJ, Nature. 2006 Jun 29;441(7097):1167-71. Epub 2006 May 21. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16728979 16728979]
Structural basis for gene regulation by a thiamine pyrophosphate-sensing riboswitch., Serganov A, Polonskaia A, Phan AT, Breaker RR, Patel DJ, Nature. 2006 Jun 29;441(7097):1167-71. Epub 2006 May 21. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16728979 16728979]
[[Category: Protein complex]]
[[Category: Serganov, A.]]
[[Category: Serganov, A.]]
[[Category: riboswitch]]
[[Category: Riboswitch]]
[[Category: thiamine pyrophosphate]]
[[Category: Thiamine pyrophosphate]]
 
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