1giq: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older editNewer edit →
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,332,843 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,332,843 edits
No edit summary
Line 1: Line 1:
[[Image:1giq.jpg|left|200px]]
{{Seed}}
[[Image:1giq.png|left|200px]]


<!--
<!--
Line 9: Line 10:
{{STRUCTURE_1giq|  PDB=1giq  |  SCENE=  }}  
{{STRUCTURE_1giq|  PDB=1giq  |  SCENE=  }}  


'''CRYSTAL STRUCTURE OF THE ENZYMATIC COMPONET OF IOTA-TOXIN FROM CLOSTRIDIUM PERFRINGENS WITH NADH'''
===CRYSTAL STRUCTURE OF THE ENZYMATIC COMPONET OF IOTA-TOXIN FROM CLOSTRIDIUM PERFRINGENS WITH NADH===




==Overview==
<!--  
Iota-toxin from Clostridium perfringens type E is an ADP-ribosylating toxin (ADPRT) that ADP-ribosylates actin, which is lethal and dermonecrotic in mammals. It is a binary toxin composed of an enzymatic component (Ia) and a binding component (Ib). Ia ADP-ribosylates G-actin at arginine 177, resulting in the depolymerization of the actin cytoskeleton. Here, we report on studies of the structure-function relationship by the crystal structures of Ia complexed with NADH and NADPH (at 1.8 A and 2.1 A resolution, respectively) and mutagenesis that map the active residues. The catalytic C-domain structure was similar to that of Bacillus cereus vegetative insecticidal protein (VIP2), which is an insect-targeted toxin, except for the EXE loop region. However, a significant structural difference could be seen in the N-domain, which interacts with Ib, suggesting an evolutionary difference between mammalian-targeted and insect-targeted ADPRT. The high resolution structure analysis revealed specific NAD conformation (a ring-like conformation of nicotinamide mononucleotide (NMN)) supported by Arg295, Arg296, Asn335, Arg352 and Glu380. Additionally, the mutagenesis study showed that the residues Tyr251, Arg295, Glu301, Ser338, Phe349, Arg352 and Glu380, including a newly identified one, are essential for NAD(+)-glycohydrolase (NADase) activity. At least one residue, Glu378, is an essential residue for ADP-ribosyltransferase (ARTase), but not for NADase. Consequently, the structural feature and these mutagenesis findings suggest that the catalytic mechanism of Ia proceeds via an Sn1-type reaction.
The line below this paragraph, {{ABSTRACT_PUBMED_12498797}}, adds the Publication Abstract to the page
(as it appears on PubMed at http://www.pubmed.gov), where 12498797 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_12498797}}


==About this Structure==
==About this Structure==
Line 31: Line 35:
[[Category: Tsuge, H.]]
[[Category: Tsuge, H.]]
[[Category: Enzymatic component]]
[[Category: Enzymatic component]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 17:37:25 2008''
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 1 05:21:28 2008''

Revision as of 02:21, 1 July 2008

File:1giq.png

Template:STRUCTURE 1giq

CRYSTAL STRUCTURE OF THE ENZYMATIC COMPONET OF IOTA-TOXIN FROM CLOSTRIDIUM PERFRINGENS WITH NADH

Template:ABSTRACT PUBMED 12498797

About this Structure

1GIQ is a Single protein structure of sequence from Clostridium perfringens. Full crystallographic information is available from OCA.

Reference

Crystal structure and site-directed mutagenesis of enzymatic components from Clostridium perfringens iota-toxin., Tsuge H, Nagahama M, Nishimura H, Hisatsune J, Sakaguchi Y, Itogawa Y, Katunuma N, Sakurai J, J Mol Biol. 2003 Jan 17;325(3):471-83. PMID:12498797

Page seeded by OCA on Tue Jul 1 05:21:28 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "https://proteopedia.org/index.php?title=1giq&oldid=602398"