1vza: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older editNewer edit →
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,332,843 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,332,843 edits
No edit summary
Line 1: Line 1:
[[Image:1vza.gif|left|200px]]
{{Seed}}
[[Image:1vza.png|left|200px]]


<!--
<!--
Line 9: Line 10:
{{STRUCTURE_1vza|  PDB=1vza  |  SCENE=  }}  
{{STRUCTURE_1vza|  PDB=1vza  |  SCENE=  }}  


'''THYMIDYLATE SYNTHASE E60D MUTANT BINARY COMPLEX WITH 2'-DEOXYURIDINE 5'-MONOPHOSPHATE (DUMP)'''
===THYMIDYLATE SYNTHASE E60D MUTANT BINARY COMPLEX WITH 2'-DEOXYURIDINE 5'-MONOPHOSPHATE (DUMP)===




==Overview==
<!--  
Three steps along the pathway of binding, orientation of substrates and release of products are revealed by X-ray crystallographic structures of ternary complexes of the wild-type Lactobacillus casei thymidylate synthase enzyme. Each complex was formed by diffusion of either the cofactor 5,10-methylene-5,6,7,8-tetrahydrofolate or the folate analog 10-propargyl-5,8-dideazafolate into binary co-crystals of thymidylate synthase with 2'-deoxyuridine-5'-monophosphate. A two-substrate/enzyme complex is formed where the substrates remain unaltered. The imidazolidine ring is unopened and the pterin of the 5,10-methylene-5,6,7,8-tetrahydrofolate cofactor binds at an unproductive "alternate" site. We propose that the presence of the pterin at this site may represent an initial interaction with the enzyme that precedes all catalytic events. The structure of the 2'-deoxyuridine-5'-monophosphate and 10-propargyl-5,8-dideazafolate folate analog complex identifies both ligands in orientations favorable for the initiation of catalysis and resembles the productive complex. A product complex where the ligands have been converted into products of the thymidylate synthase reaction within the crystal, 2'-deoxythymidine-5'-monophosphate and 7,8-dihydrofolate, shows how ligands are situated within the enzyme after catalysis and on the way to product release.
The line below this paragraph, {{ABSTRACT_PUBMED_8568895}}, adds the Publication Abstract to the page
(as it appears on PubMed at http://www.pubmed.gov), where 8568895 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_8568895}}


==About this Structure==
==About this Structure==
Line 28: Line 32:
[[Category: Methyltransferase]]
[[Category: Methyltransferase]]
[[Category: Nucleotide synthase]]
[[Category: Nucleotide synthase]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 12:56:49 2008''
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 01:33:22 2008''

Revision as of 22:33, 27 July 2008

File:1vza.png

Template:STRUCTURE 1vza

THYMIDYLATE SYNTHASE E60D MUTANT BINARY COMPLEX WITH 2'-DEOXYURIDINE 5'-MONOPHOSPHATE (DUMP)

Template:ABSTRACT PUBMED 8568895

About this Structure

1VZA is a Single protein structure of sequence from Lactobacillus casei. Full crystallographic information is available from OCA.

Reference

Entropy in bi-substrate enzymes: proposed role of an alternate site in chaperoning substrate into, and products out of, thymidylate synthase., Birdsall DL, Finer-Moore J, Stroud RM, J Mol Biol. 1996 Jan 26;255(3):522-35. PMID:8568895

Page seeded by OCA on Mon Jul 28 01:33:22 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "https://proteopedia.org/index.php?title=1vza&oldid=675141"