2cjk: Difference between revisions

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[[Image:2cjk.jpg|left|200px]]
{{Seed}}
[[Image:2cjk.png|left|200px]]


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{{STRUCTURE_2cjk|  PDB=2cjk  |  SCENE=  }}  
{{STRUCTURE_2cjk|  PDB=2cjk  |  SCENE=  }}  


'''STRUCTURE OF THE RNA BINDING DOMAIN OF HRP1 IN COMPLEX WITH RNA'''
===STRUCTURE OF THE RNA BINDING DOMAIN OF HRP1 IN COMPLEX WITH RNA===




==Overview==
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The recognition of specific signals encoded within the 3'-untranslated region of the newly transcribed mRNA triggers the assembly of a multiprotein machine that modifies its 3'-end. Hrp1 recognises one of such signals, the so-called polyadenylation enhancement element (PEE), promoting the recruitment of other polyadenylation factors in yeast. The molecular bases of this interaction are revealed here by the solution structure of a complex between Hrp1 and an oligonucleotide mimicking the PEE. Six consecutive bases (AUAUAU) are specifically recognised by two RNA-binding domains arranged in tandem. Both protein and RNA undergo significant conformational changes upon complex formation with a concomitant large surface burial of RNA bases. Key aspects of RNA specificity can be explained by the presence of intermolecular aromatic-aromatic contacts and hydrogen bonds. Altogether, the Hrp1-PEE structure represents one of the first steps towards understanding of the assembly of the cleavage and polyadenylation machinery at the atomic level.
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{{ABSTRACT_PUBMED_16794580}}


==About this Structure==
==About this Structure==
2CJK is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CJK OCA].  
2CJK is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CJK OCA].  


==Reference==
==Reference==
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[[Category: Rna-binding]]
[[Category: Rna-binding]]
[[Category: Rna-binding protein]]
[[Category: Rna-binding protein]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 22:17:42 2008''
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 02:15:37 2008''

Revision as of 23:15, 27 July 2008

File:2cjk.png

Template:STRUCTURE 2cjk

STRUCTURE OF THE RNA BINDING DOMAIN OF HRP1 IN COMPLEX WITH RNA

Template:ABSTRACT PUBMED 16794580

About this Structure

2CJK is a Single protein structure of sequence from Saccharomyces cerevisiae. Full experimental information is available from OCA.

Reference

Grabbing the message: structural basis of mRNA 3'UTR recognition by Hrp1., Perez-Canadillas JM, EMBO J. 2006 Jul 12;25(13):3167-78. Epub 2006 Jun 22. PMID:16794580

Page seeded by OCA on Mon Jul 28 02:15:37 2008

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