1py3: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older editNewer edit →
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
Line 1: Line 1:
[[Image:1py3.jpg|left|200px]]
{{Seed}}
[[Image:1py3.png|left|200px]]


<!--
<!--
Line 9: Line 10:
{{STRUCTURE_1py3|  PDB=1py3  |  SCENE=  }}  
{{STRUCTURE_1py3|  PDB=1py3  |  SCENE=  }}  


'''Crystal structure of Ribonuclease Sa2'''
===Crystal structure of Ribonuclease Sa2===




==Overview==
<!--
Three different strains of Streptomyces aureofaciens produce the homologous ribonucleases Sa, Sa2 and Sa3. The crystal structures of ribonuclease Sa (RNase Sa) and its complexes with mononucleotides have previously been reported at high resolution. Here, the structures of two crystal forms (I and II) of ribonuclease Sa2 (RNase Sa2) are presented at 1.8 and 1.5 A resolution. The structures were determined by molecular replacement using the coordinates of RNase Sa as a search model and were refined to R factors of 17.5 and 15.0% and R(free) factors of 21.8 and 17.2%, respectively. The asymmetric unit of crystal form I contains three enzyme molecules, two of which have similar structures to those seen for ribonuclease Sa, with Tyr87 at the bottom of their active sites. In the third molecule, Tyr87 has moved substantially: the CA atom moves almost 5 A and the OH of the side chain moves 10 A, inserting itself into the active site of a neighbouring molecule at a similar position to that observed for the nucleotide base in RNase Sa complexes. The asymmetric unit of crystal form II contains two Sa2 molecules, both of which are similar to the usual Sa structures. In one molecule, two main-chain conformations were modelled in the alpha-helix. Finally, a brief comparison is made between the conformations of the Sa2 molecules and those of 34 independent molecules taken from 20 structures of ribonuclease Sa and two independent molecules taken from two structures of ribonuclease Sa3 in various crystal forms.
The line below this paragraph, {{ABSTRACT_PUBMED_15213380}}, adds the Publication Abstract to the page
(as it appears on PubMed at http://www.pubmed.gov), where 15213380 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_15213380}}


==About this Structure==
==About this Structure==
Line 26: Line 30:
[[Category: Wilson, K S.]]
[[Category: Wilson, K S.]]
[[Category: Alpha-beta structure]]
[[Category: Alpha-beta structure]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 05:38:00 2008''
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 16:49:46 2008''

Revision as of 13:49, 28 July 2008

File:1py3.png

Template:STRUCTURE 1py3

Crystal structure of Ribonuclease Sa2

Template:ABSTRACT PUBMED 15213380

About this Structure

1PY3 is a Single protein structure of sequence from Streptomyces aureofaciens. Full crystallographic information is available from OCA.

Reference

Crystal structure reveals two alternative conformations in the active site of ribonuclease Sa2., Sevcik J, Dauter Z, Wilson KS, Acta Crystallogr D Biol Crystallogr. 2004 Jul;60(Pt 7):1198-204. Epub 2004, Jun 22. PMID:15213380

Page seeded by OCA on Mon Jul 28 16:49:46 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "https://proteopedia.org/index.php?title=1py3&oldid=707819"