2bgw: Difference between revisions

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[[Image:2bgw.gif|left|200px]]
{{Seed}}
[[Image:2bgw.png|left|200px]]


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{{STRUCTURE_2bgw|  PDB=2bgw  |  SCENE=  }}  
{{STRUCTURE_2bgw|  PDB=2bgw  |  SCENE=  }}  


'''XPF FROM AEROPYRUM PERNIX, COMPLEX WITH DNA'''
===XPF FROM AEROPYRUM PERNIX, COMPLEX WITH DNA===




==Overview==
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The XPF/Mus81 structure-specific endonucleases cleave double-stranded DNA (dsDNA) within asymmetric branched DNA substrates and play an essential role in nucleotide excision repair, recombination and genome integrity. We report the structure of an archaeal XPF homodimer alone and bound to dsDNA. Superposition of these structures reveals a large domain movement upon binding DNA, indicating how the (HhH)(2) domain and the nuclease domain are coupled to allow the recognition of double-stranded/single-stranded DNA junctions. We identify two nonequivalent DNA-binding sites and propose a model in which XPF distorts the 3' flap substrate in order to engage both binding sites and promote strand cleavage. The model rationalises published biochemical data and implies a novel role for the ERCC1 subunit of eukaryotic XPF complexes.
The line below this paragraph, {{ABSTRACT_PUBMED_15719018}}, adds the Publication Abstract to the page
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{{ABSTRACT_PUBMED_15719018}}


==About this Structure==
==About this Structure==
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[[Category: Nucleotide excision repair]]
[[Category: Nucleotide excision repair]]
[[Category: Structure specific endonuclease]]
[[Category: Structure specific endonuclease]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 20:16:12 2008''
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 05:57:04 2008''

Revision as of 02:57, 29 July 2008

File:2bgw.png

Template:STRUCTURE 2bgw

XPF FROM AEROPYRUM PERNIX, COMPLEX WITH DNA

Template:ABSTRACT PUBMED 15719018

About this Structure

2BGW is a Single protein structure of sequence from Aeropyrum pernix. Full crystallographic information is available from OCA.

Reference

Structure of an XPF endonuclease with and without DNA suggests a model for substrate recognition., Newman M, Murray-Rust J, Lally J, Rudolf J, Fadden A, Knowles PP, White MF, McDonald NQ, EMBO J. 2005 Mar 9;24(5):895-905. Epub 2005 Feb 17. PMID:15719018

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