1diz: Difference between revisions

Revision as of 13:10, 16 February 2009

This article has been automatically seeded. Changes to this page should pertain to the PDB entry only and not to the protein or biomolecule in general.

1diz, resolution 2.50Å (default scene)

Ligands:

NA

Non-Standard Residues:

NRI

Activity:

DNA-3-methyladenine glycosylase II, with EC number 3.2.2.21

Structural annotation:
Resources:	CATH : 1Diza02, 1Diza03, 1Diza01, 1Dizb01, 1Dizb02, 1Dizb03 InterPro : Ipr000035, Ipr003265, Ipr011257, Ipr010316, Ipr012294 Pfam : PF00730, PF06029 SCOP : d1diza1, d1diza2, d1dizb1, d1dizb2 UniProt : P04395

Functional annotation:
Biological process:	response to DNA damage stimulus base-excision repair DNA repair
Molecular function:	hydrolase activity DNA binding protein binding alkylbase DNA N-glycosylase activity

Evolutionary conservation:

Toggle Conservation Colors:

Rows = identical sequences:

Further Information:

Caveats,

Explanation,
Complete Results at ConSurfDB

Resources:

FirstGlance, OCA, PDBsum, RCSB

Coordinates:

save as pdb, mmCIF, xml

CRYSTAL STRUCTURE OF E. COLI 3-METHYLADENINE DNA GLYCOSYLASE (ALKA) COMPLEXED WITH DNA

Template:ABSTRACT PUBMED 10675345

About this Structure

1DIZ is a 6 chains structure of sequences from Escherichia coli. Full crystallographic information is available from OCA.

Reference

Hollis T, Ichikawa Y, Ellenberger T. DNA bending and a flip-out mechanism for base excision by the helix-hairpin-helix DNA glycosylase, Escherichia coli AlkA. EMBO J. 2000 Feb 15;19(4):758-66. PMID:10675345 doi:https://dx.doi.org/10.1093/emboj/19.4.758

Page seeded by OCA on Mon Feb 16 15:10:55 2009

Proteopedia Page Contributors and Editors (what is this?)

OCA

[1] Hollis T, Ichikawa Y, Ellenberger T. DNA bending and a flip-out mechanism for base excision by the helix-hairpin-helix DNA glycosylase, Escherichia coli AlkA. EMBO J. 2000 Feb 15;19(4):758-66. PMID:10675345 doi:https://dx.doi.org/10.1093/emboj/19.4.758

@@ Line 20: / Line 20: @@
 ==About this Structure==
-DIZ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DIZ OCA].
+DIZ is a 6 chains structure of sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DIZ OCA].
 ==Reference==
-DNA bending and a flip-out mechanism for base excision by the helix-hairpin-helix DNA glycosylase, Escherichia coli AlkA., Hollis T, Ichikawa Y, Ellenberger T, EMBO J. 2000 Feb 15;19(4):758-66. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10675345 10675345]
+<ref group="xtra">PMID:10675345</ref><references group="xtra"/>
 [[Category: DNA-3-methyladenine glycosylase II]]
 [[Category: Escherichia coli]]
-[[Category: Single protein]]
 [[Category: Ellenberger, T E.]]
 [[Category: Hollis, T.]]
@@ Line 36: / Line 35: @@
 [[Category: Protein-dna complex]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 23:08:12 2008''
+''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 15:10:55 2009''

1diz: Difference between revisions

Revision as of 13:10, 16 February 2009

CRYSTAL STRUCTURE OF E. COLI 3-METHYLADENINE DNA GLYCOSYLASE (ALKA) COMPLEXED WITH DNA

About this Structure

Reference

Proteopedia Page Contributors and Editors (what is this?)

Navigation menu

Page actions

Page actions

Personal tools

Navigation

Search

Tools