Sandbox4: Difference between revisions

From Proteopedia
Jump to navigationJump to search
Student (talk | contribs)
No edit summary
No edit summary
Line 3: Line 3:


Name: Jamal Salah and Vishwa Shah!   
Name: Jamal Salah and Vishwa Shah!   
LKT:
Does your overview of the structure convey the secondary elements? (ie 5 alpha helices and 2 beta strands)
I see problems with greek letters on the JMol, so best to write out alpha and beta.
Be sure you include your reference to your source.


{{STRUCTURE_101m |  PDB=101m  |  SCENE=  }}
{{STRUCTURE_101m |  PDB=101m  |  SCENE=  }}

Revision as of 20:35, 11 March 2009

This sandbox is in use until June 1, 2009 for UMass Chemistry 490a. Others please do not edit this page. Thanks!'


Name: Jamal Salah and Vishwa Shah!

LKT: Does your overview of the structure convey the secondary elements? (ie 5 alpha helices and 2 beta strands) I see problems with greek letters on the JMol, so best to write out alpha and beta. Be sure you include your reference to your source.


Drag the structure with the mouse to rotate
101m, resolution 2.07Å (default scene)
Ligands: HEM, NBN, SO4
Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml




Deoxyhemoglobin

The major oxygen-binding molecule in man, responsible for binding oxygen in the lung and transporting it to the tissues by means of circulation. Hemoglobin is an iron Fe chelate tightly binding one Fe where it carries a 2+ charge(ferrous ion). If no oxygen molecule is bound it is called deoxyheemoglobin. Deoxyhemoglobin is a tetramer of alpha and beta strands. The Overall Structure is shown here. Deoxyhemoglobin contanis a Heme group, as well as a a Hydrophobic residue (HIST)(highlighted in green)

Reference:

1).[[ https://www.medcyclopaedia.com/library/topics/volume_i/d/deoxyhaemoglobin.aspx]]

2) https://www.proteopedia.org/wiki/index.php/Hemoglobin