3iaf | pdb_00003iaf

Structure of benzaldehyde lyase A28S mutant with monomethyl benzoylphosphonate

spinqualitylabelsall models 3iaf, resolution 2.80Å Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image   Print3D Structural highlights 3iaf is a 4 chain structure with sequence from Pseudomonas fluorescens. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance. Ligands: MG, TPP NonStd Res: SEP Related: 3iae Gene: bznB (Pseudomonas fluorescens) Activity: Benzoin aldolase, with EC number 4.1.2.38 Resources: FirstGlance, OCA, RCSB, PDBsum Evolutionary Conservation Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf. Publication Abstract from PubMed Benzaldehyde lyase (BAL) from Pseudomonas putida is a thiamin diphosphate (ThDP)-dependent enzyme that catalyzes the breakdown of (R)-benzoin. Here we report that a point mutant, BAL A28S, not only catalyzes the decarboxylation of benzoylformate but, like benzoylformate decarboxylase (BFDC), is also inactivated by the benzoylformate analogues methyl benzoylphosphonate (MBP) and benzoylphosphonate (BP). The latter has no effect on wild-type BAL, and the inactivation of the A28S variant is shown to result from phosphorylation of the newly introduced serine residue. This lends support to the proposal that an appropriately placed nucleophile facilitates the expulsion of carbon dioxide from the active site in many ThDP-dependent decarboxylases. Active-site engineering of benzaldehyde lyase shows that a point mutation can confer both new reactivity and susceptibility to mechanism-based inhibition.,Brandt GS, Kneen MM, Petsko GA, Ringe D, McLeish MJ J Am Chem Soc. 2010 Jan 20;132(2):438-9. PMID:20030408 From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

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