1dpl | pdb_00001dpl

From Proteopedia
Revision as of 16:46, 30 March 2008 by OCA (talk | contribs)
Jump to navigationJump to search


A-DNA DECAMER GCGTA(T23)TACGC WITH INCORPORATED 2'-METHOXY-3'-METHYLENEPHOSPHATE-THYMIDINE

File:1dpl.gif


Drag the structure with the mouse to rotate
1dpl, resolution 0.83Å
Ligands: DA, DC, DG, DT, MG, SPM, T23
Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml



Overview

We have determined single crystal structures of an A-DNA decamer and a B-DNA dodecamer at 0.83 and 0.95 A, respectively. The resolution of the former is the highest reported thus far for any right-handed nucleic acid duplex and the quality of the diffraction data allowed determination of the structure with direct methods. The structures reveal unprecedented details of DNA fine structure and hydration; in particular, we have reexamined the overall hydration of A- and B-form DNA, the distribution of water around phosphate groups, and features of the water structure that may underlie the B to A transition.

About this Structure

1DPL is a Protein complex structure of sequences from [1]. Full crystallographic information is available from OCA.

Reference

X-ray crystallographic analysis of the hydration of A- and B-form DNA at atomic resolution., Egli M, Tereshko V, Teplova M, Minasov G, Joachimiak A, Sanishvili R, Weeks CM, Miller R, Maier MA, An H, Dan Cook P, Manoharan M, Biopolymers. 1998;48(4):234-52. PMID:10699842

Page seeded by OCA on Sun Mar 30 19:46:11 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA