4xyd | pdb_00004xyd

Nitric oxide reductase from Roseobacter denitrificans (RdNOR)

spinqualitylabelsall models 4xyd, resolution 2.85Å Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image   Print3D Structural highlights 4xyd is a 2 chain structure with sequence from Roseobacter denitrificans (strain atcc 33942 / och 114). Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance. Ligands: CA, CU, FE, HEC, HEM, UNL Activity: Nitric-oxide reductase (cytochrome c), with EC number 1.7.2.5 Resources: FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT Publication Abstract from PubMed Membrane-intrinsic nitric oxide reductases (NORs) are key components of bacterial denitrification pathways with a close evolutionary relationship to the cytochrome oxidase (COX) complex found in aerobic respiratory chains. A key distinction between COX and NOR is the identity of the metal directly opposite the heme b3 within the active site. In NOR, this metal is iron (FeB) whereas in COX it is copper (CuB). The purified NOR of Roseobacter denitrificans contains copper and has modest oxidase activity raising the possibility that a COX-like active site might have independently arisen within the context of a NOR-like protein scaffold. Here we present the crystal structure of the Roseobacter denitrificans NorBC complex and anomalous scattering experiments probing the identity of each metal centre. Our results refute the hypothesis that copper occupies the active site and instead reveal a new metal centre in the small subunit not seen in any other NOR or COX. Structure of the membrane-intrinsic nitric oxide reductase from Roseobacter denitrificans.,Crow A, Matsuda Y, Arata H, Oubrie A Biochemistry. 2016 May 17. PMID:27185533 From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

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