6gef | pdb_00006gef

X-ray structure of the Yersinia pseudotuberculosis ATPase DotB

spinqualitylabelsall models 6gef, resolution 2.75Å Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image   Print3D Structural highlights 6gef is a 6 chain structure with sequence from Yerp3. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance. Related: 6geb Gene: YpsIP31758_B0110 (YERP3) Resources: FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT Publication Abstract from PubMed Human infections by the intracellular bacterial pathogen Legionella pneumophila result in a severe form of pneumonia, the Legionnaire's disease. L. pneumophila utilises a type IVb secretion (T4bS) system termed "dot/icm" to secrete protein effectors to the host cytoplasm. The dot/icm system is powered at least in part by a functionally critical AAA+ ATPase, a protein called DotB, thought to belong to the VirB11 family of proteins. Here we present the crystal structure of DotB at 3.19 A resolution, in its hexameric form. We observe that DotB is in fact a structural intermediate between VirB11 and PilT family proteins, with a PAS-like N-terminal domain coupled to a RecA-like C-terminal domain. It also shares critical structural elements only found in PilT. The structure also reveals two conformers, termed alpha and beta, with an alphabetaalphabetaalphabeta configuration. The existence of alpha and beta conformers in this class of proteins was confirmed by solving the structure of DotB from another bacterial pathogen, Yersinia, where, intriguingly, we observed an alphaalphabetaalphaalphabeta configuration. The two conformers co-exist regardless of the nucleotide-bound states of the proteins. Our investigation therefore reveals that these ATPases can adopt a wider range of conformational states than was known before, shedding new light on the extraordinary spectrum of conformations these ATPases can access to carry out their function. Overall, the structure of DotB provides a template for further rational drug-design to develop more specific antibiotics to tackle Legionnaire's disease. This article is protected by copyright. All rights reserved. X-ray Crystal Structures of the Type IVb Secretion System DotB ATPases.,Prevost MS, Waksman G Protein Sci. 2018 May 17. doi: 10.1002/pro.3439. PMID:29770512 From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

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