6a82 | pdb_00006a82

Crystal structure of the C-terminal periplasmic domain of EcEptC from Escherichia coli

spinqualitylabelsall models 6a82, resolution 2.10Å Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image   Print3D Structural highlights 6a82 is a 3 chain structure with sequence from Ecoli. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance. Ligands: NA NonStd Res: MSE Gene: eptC, cptA, yijP, b3955, JW3927 (ECOLI) Resources: FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT Function [EPTC_ECOLI] Catalyzes the addition of a phosphoethanolamine moiety to the outer membrane lipopolysaccharide core. Publication Abstract from PubMed Gram-negative bacteria defend against the toxicity of polymyxins by modifying their outer membrane lipopolysaccharide (LPS). This modification mainly occurs through the addition of cationic molecules such as phosphoethanolamine (PEA). EcEptC is a PEA transferase from Escherichia coli (E. coli). However, unlike its homologs CjEptC (Campylobacter jejuni) and MCR-1, EcEptC is unable to mediate polymyxin resistance when overexpressed in E. coli. Here, we report crystal structures of the C-terminal putative catalytic domain (EcEptCDeltaN, 205-577 aa) of EcEptC in apo and Zn(2+) -bound states at 2.10 and 2.60 A, respectively. EcEptCDeltaN is arranged into an alpha-beta-alpha fold and equipped with the zinc ion in a conserved mode. Coupled with isothermal titration calorimetry (ITC) data, we provide insights into the mechanism by which EcEptC recognizes Zn(2+) . Furthermore, structure comparison analysis indicated that disulfide bonds, which play a key role in polymyxin resistance, were absent in EcEptCDeltaN. Supported by structural and biochemical evidence, we reveal mechanistic implications for disulfide bonds in PEA transferase-mediated polymyxin resistance. Significantly, because the structural effects exhibited by disulfide bonds are absent in EcEptC, it is impossible for this protein to participate in polymyxin resistance in E. coli. DATABASE: Structural data are available in the PDB under the accession numbers 6A82 and 6A83. ENZYME: EC 2.7.8.43. Structural and mechanistic insights into polymyxin resistance mediated by EptC originating from Escherichia coli.,Zhao Y, Meng Q, Lai Y, Wang L, Zhou D, Dou C, Gu Y, Nie C, Wei Y, Cheng W FEBS J. 2018 Dec 7. doi: 10.1111/febs.14719. PMID:30537137 From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

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