6n1b | pdb_00006n1b

Crystal structure of an N-acetylgalactosamine deacetylase from F. plautii in complex with blood group B trisaccharide

spinqualitylabelsall models 6n1b, resolution 1.30Å Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image   Print3D Structural highlights 6n1b is a 1 chain structure with sequence from "bacillus_plauti"_(sic)_seguin_1928 "bacillus plauti" (sic) seguin 1928. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance. Ligands: CA, FUC, GAL, GLA, GOL Gene: A4U99_12080 ("Bacillus plauti" (sic) Seguin 1928) Resources: FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT Publication Abstract from PubMed Access to efficient enzymes that can convert A and B type red blood cells to 'universal' donor O would greatly increase the supply of blood for transfusions. Here we report the functional metagenomic screening of the human gut microbiome for enzymes that can remove the cognate A and B type sugar antigens. Among the genes encoded in our library of 19,500 expressed fosmids bearing gut bacterial DNA, we identify an enzyme pair from the obligate anaerobe Flavonifractor plautii that work in concert to efficiently convert the A antigen to the H antigen of O type blood, via a galactosamine intermediate. The X-ray structure of the N-acetylgalactosamine deacetylase reveals the active site and mechanism of the founding member of an esterase family. The galactosaminidase expands activities within the CAZy family GH36. Their ability to completely convert A to O of the same rhesus type at very low enzyme concentrations in whole blood will simplify their incorporation into blood transfusion practice, broadening blood supply. An enzymatic pathway in the human gut microbiome that converts A to universal O type blood.,Rahfeld P, Sim L, Moon H, Constantinescu I, Morgan-Lang C, Hallam SJ, Kizhakkedathu JN, Withers SG Nat Microbiol. 2019 Jun 10. pii: 10.1038/s41564-019-0469-7. doi:, 10.1038/s41564-019-0469-7. PMID:31182795 From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

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