6vd7 | pdb_00006vd7

Cryo-EM structure of Xenopus tropicalis pannexin 1 channel

spinqualitylabelsall models 6vd7, resolution 3.02Å Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image   Print3D Structural highlights 6vd7 is a 7 chain structure. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance. Resources: FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT Function [B3DLA5_XENTR] Structural component of the gap junctions and the hemichannels.[RuleBase:RU010713] Publication Abstract from PubMed Pannexins are large-pore forming channels responsible for ATP release under a variety of physiological and pathological conditions. Although predicted to share similar membrane topology with other large-pore forming proteins such as connexins, innexins, and LRRC8, pannexins have minimal sequence similarity to these protein families. Here, we present the cryo-EM structure of a frog pannexin 1 (Panx1) channel at 3.0 A. We find that Panx1 protomers harbor four transmembrane helices similar in arrangement to other large-pore forming proteins but assemble as a heptameric channel with a unique constriction formed by Trp74 in the first extracellular loop. Mutating Trp74 or the nearby Arg75 disrupt ion selectivity whereas altering residues in the hydrophobic groove formed by the two extracellular loops abrogates channel inhibition by carbenoxolone. Our structural and functional study establishes the extracellular loops as important structural motifs for ion selectivity and channel inhibition in Panx1. The cryo-EM structure of a pannexin 1 reveals unique motifs for ion selection and inhibition.,Michalski K, Syrjanen JL, Henze E, Kumpf J, Furukawa H, Kawate T Elife. 2020 Feb 12;9. pii: 54670. doi: 10.7554/eLife.54670. PMID:32048993 From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

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