Argonaute 3D structures

3D Structures of Argonaute

Updated on 14-June-2020

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• Argonaute 1
  • 1si2, 1si3 – hAGO1 PAZ domain + RNA - human
    
  • 4kre, 4krf, 4kxt - hAGO1 + RNA
    
  • 5w6v - hAGO1 + RNA + protein GW1
    
  • 1r4k – DmAGO1 PAZ domain – Drosophila melanogaster
    
  • 4g0p, 4g0x, 3vna – AtAGO1 MID domain – Arabidopsis thaliana
    
  • 3vnb – AtAGO1 MID domain (mutant)
    
  • 4g0q, 4g0y, 4g0z – AtAGO1 MID domain + nucleotide
    
• Argonaute 2
  • 3luc, 3luk – hAGO2 MID domain
    
  • 3lud, 3lug, 3luh, 3luj, 3qx8, 3qx9 – hAGO2 MID domain + nucleotide
    
  • 4w5n, 4w5q, 4w5r, 4w5t, 5js1, 4z4i, 4z4h, 4z4g, 4z4f, 4z4e, 4z4d, 4z4c, 4ola, 5js2, 5wea, 6cbd, 6mdz, 6mfn, 6mfr, 6n4o, 6nit – hAGO2 (mutant) + RNA
    
  • 4olb - hAGO2 (mutant) + RNA + tryptophan
    
  • 4f3t, 4w5o, 5t7b – hAGO2 + RNA
    
  • 5ki6 – hAGO2 + MIR-122
    
  • 1r6z – DmAGO2 PAZ domain/MBP
    
  • 1vyn – DmAGO2 PAZ domain - NMR
    
  • 1t2r, 1t2s – DmAGO2 PAZ domain + RNA - NMR
    
  • 3mj0 – DmAGO2 PAZ domain + RNA
    
  • 4g0m, 4g0o – AtAGO2 MID domain
    
• Argonaute 3
  • 5vm9 – hAGO3 + RNA
    
• Argonaute 4
  • 6oon – hAGO4 + RNA
    
• Argonaute
  • 1u04, 1z25, 1z26 – AGO (mutant) – Pyrococcus furiosus
    
  • 2f8s, 2f8t – AaAGO + RNA – Aquifex aeolicus
    
  • 2f8t, 2nub – AaAGO
    
  • 3da5 – AGO – Thermococcus thioreducens
    
  • 3dlb, 3dlh, 3f73, 3hm9, 3hvr, 3hxm, 4n41, 4n47, 4n76, 4nca, 4ncb, 5gq9 – TtAGO + DNA – Thermus thermophilus
    
  • 3hjf, 3hk2, 3ho1 – TtAGO (mutant) + DNA
    
  • 5i4a – MpAGO + RNA – Marinitoga piezophila
    
  • 5ux0 – MpAGO (mutant) + RNA + DNA
    
  • 5g5s – MjAGO – Methanocaldococcus jannaschii
    
  • 5g5t – MjAGO + DNA
    
  • 6qzk – AGO (mutant) + DNA – Clostridium butyricum
    

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Michal Harel