3D structures of methyl CpG binding protein
Updated on 07-September-2020
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- Methyl CpG binding protein 1 (MBD1)Domains - MBD 1-77; CXXC1 – 167-222; zinc finger 330-388;
- 6d1t – hMBD1 MBD domain + DNA – human
- 1ig4 – hMBD1 MBD domain + DNA – NMR
- 1d9n - hMBD1 MBD domain – NMR
- 4d4w - hMBD1 CXXC1 domain – NMR
- 5w9q – hMBD1 zinc finger domain + DNA
- Methyl CpG binding protein 2 (MBD2)); Domains - MBD 77-167; coiled-coil 137-178;
- 2l2l - hMBD2 coiled-coil domain + transcriptional repressor p66-α coiled-coil domain – NMR
- 6ogj, 6ogk – hMBD2 MBD + DNA
- 5bt2 – hMBD2 MBD + methylated DNA
- 1qk9 - hMCP2 MBD domain – NMR
- 3c2i – hMCP2 MBD domain (mutant) + DNA
- 6cnp, 6cnq, 6c2f, 6c1y, 6c1v, 6c1u, 6c1t, 6c1a – hMCP2 residues 143-220 + DNA
- 2ky8 – cMBD2 MBD domain + DNA containing cytidine and uridine derivatives - NMR - chicken
- 1ub1 – cMCP2 MBD domain – NMR
- Methyl CpG binding protein 3 (MBD3)); Domains - MBD 1-77
- Methyl CpG binding protein 4 (MBD4)); Domains – MBD 83-149; glycosylate 426-580
- 3iho, 4e9e – hMBD4 glycosylate domain
- 4e9g – hMBD4 glycosylate domain + DNA
- 4dk9, 4e9f – hMBD4 glycosylate domain + DNA containing abasic dideoxyribose
- 4e9h, 4ea4, 4ea5 – hMBD4 glycosylate domain (mutant) + DNA containing hydroxymethyluracil
- 4lg7, 2moe – hMBD4 MBD + DNA containing cytidine derivative
- 5chz – hMBD4 MBD + DNA containing mismatch
- 4ofa, 4ofe, 4ofh – hMBD4 MBD (mutant) + DNA containing mismatch
- 1ngn - mMBD4 glycosylate domain – mouse
- 4ew4 – mMBD4 glycosylate domain + DNA containing abasic dideoxyribose
- 4evv – mMBD4 glycosylate domain + DNA containing mismatch
- 4ew0 – mMBD4 glycosylate domain (mutant) + DNA containing hydroxymethyluracil
- 3vxv, 3vxx, 3vyb, 3vyq – mMBD4 MBD + DNA containing cytidine derivative
Methyl CpG binding protein 11 (MBD11)
- 6acv – MBD11 MBD domain – Arabidopsis thaliana - NMR
