3aey | pdb_00003aey

Apo form of threonine synthase from Thermus thermophilus HB8

spinqualitylabelsall models 3aey, resolution 1.92Å Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image   Print3D Structural highlights 3aey is a 2 chain structure with sequence from Thermus thermophilus HB8. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance. Method: X-ray diffraction, Resolution 1.92Å Ligands: SO4 Resources: FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT Function Q5SL02_THET8 Catalyzes the gamma-elimination of phosphate from L-phosphohomoserine and the beta-addition of water to produce L-threonine.[PIRNR:PIRNR038945] Publication Abstract from PubMed Threonine synthase (TS), which is a pyridoxal 5'-phosphate (PLP)-dependent enzyme, catalyzes the elimination of the gamma-phosphate group from O-phospho-L-homoserine (OPHS) and the subsequent addition of water at Cbeta to form L-threonine. The catalytic course of TS is the most complex among the PLP enzymes, and it is an intriguing problem how the elementary steps are controlled in TS to carry out selective reactions. When L-vinylglycine was added to Thermus thermophilus HB8 TS in the presence of phosphate, L-threonine was formed with k(cat) and reaction specificity comparable with those when OPHS was used as the substrate. However, in the absence of phosphate or when sulfate was used in place of phosphate, only the side reaction product, alpha-ketobutyrate, was formed. Global analysis of the spectral changes in the reaction of TS with L-threonine showed that compared with the more acidic sulfate ion, the phosphate ion decreased the energy levels of the transition states of the addition of water at the Cbeta of the PLP-alpha-aminocrotonate aldimine (AC) and the transaldimination to form L-threonine. The x-ray crystallographic analysis of TS complexed with an analog for AC gave a distinct electron density assigned to the phosphate ion derived from the solvent near the Cbeta of the analog. These results indicated that the phosphate ion released from OPHS by gamma-elimination acts as the base catalyst for the addition of water at Cbeta of AC, thereby providing the basis of the reaction specificity. The phosphate ion is also considered to accelerate the protonation/deprotonation at Cgamma. Product-assisted catalysis as the basis of the reaction specificity of threonine synthase.,Murakawa T, Machida Y, Hayashi H J Biol Chem. 2011 Jan 28;286(4):2774-84. Epub 2010 Nov 17. PMID:21084312 From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

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