8p66 | pdb_00008p66
Structural basis of aggregate binding/recognition by the AAA+ disaggregase ClpG
Structural highlights
FunctionPublication Abstract from PubMedSevere heat stress causes massive loss of essential proteins by aggregation necessitating a cellular activity that rescues aggregated proteins. This activity is executed by ATP-dependent, ring-forming, hexameric AAA+ disaggregases. Little is known about the recognition principles of stress-induced protein aggregates. How can disaggregases specifically target aggregated proteins while avoiding binding to soluble non-native proteins? Here, we determined by NMR spectroscopy the core structure of the aggregate-targeting N1 domain of the bacterial AAA+ disaggregase ClpG, which confers extreme heat resistance to bacteria. N1 harbors a Zn(2+)-coordination site that is crucial for structural integrity and disaggregase functionality. We found that conserved hydrophobic N1 residues located on a beta-strand are crucial for aggregate targeting and disaggregation activity. Analysis of mixed hexamers consisting of full-length and N1-truncated subunits revealed that a minimal number of four N1 domains must be present in a AAA+ ring for high disaggregation activity. We suggest that multiple N1 domains increase substrate affinity through avidity effects. These findings define the recognition principle of a protein aggregate by a disaggregase, involving simultaneous contacts with multiple hydrophobic substrate patches located in close vicinity on an aggregate surface. This binding mode ensures selectivity for aggregated proteins while sparing soluble, non-native protein structures from disaggregase activity. Structural basis of aggregate binding by the AAA+ disaggregase ClpG.,Katikaridis P, Simon B, Jenne T, Moon S, Lee C, Hennig J, Mogk A J Biol Chem. 2023 Oct 10:105336. doi: 10.1016/j.jbc.2023.105336. PMID:37827289[1] From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. References
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