3wfa | pdb_00003wfa

Catalytic role of the calcium ion in GH97 inverting glycoside hydrolase

spinqualitylabelsall models 3wfa, resolution 2.00Å Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image   Print3D Structural highlights 3wfa is a 2 chain structure with sequence from Bacteroides thetaiotaomicron. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance. Method: X-ray diffraction, Resolution 2Å Ligands: EDT, NA Resources: FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT Function SUSB_BACTN Glucoamylase that hydrolyzes alpha-1,4-glucosidic linkages, alpha-1,6-, alpha-1,3- and alpha-1,2-glucosidic linkages during starch degradation. Publication Abstract from PubMed The role of calcium ion in the active site of the inverting glycoside hydrolase family 97 enzyme, BtGH97a, was investigated through structural and kinetic studies. The calcium ion was likely directly involved in the catalytic reaction. The pH dependence of kcat/Km values in the presence or absence of calcium ion indicated that the calcium ion lowered the pKa of the base catalyst. The significant decreases in kcat/Km for hydrolysis of substrates with basic leaving groups in the absence of calcium ion confirmed that the calcium ion facilitated the leaving group departure. Catalytic role of the calcium ion in GH97 inverting glycoside hydrolase.,Okuyama M, Yoshida T, Hondoh H, Mori H, Yao M, Kimura A FEBS Lett. 2014 Aug 25;588(17):3213-7. doi: 10.1016/j.febslet.2014.07.002. Epub , 2014 Jul 10. PMID:25017438 From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. See Also Alpha-glucosidase 3D structures

Proteopedia Page Contributors and Editors (what is this?)

OCA