5imq | pdb_00005imq

Structure of ribosome bound to cofactor at 3.8 angstrom resolution

Loading... Status: waiting for Mol* initialization Structural highlights 5imq is a 10 chain structure with sequence from Thermus thermophilus HB8. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance. Method: Electron Microscopy, Resolution 3.8Å Ligands: GCP Resources: FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT Function RL16_THET8 This protein binds directly to 23S rRNA. Interacts with the A site tRNA.[HAMAP-Rule:MF_01342] Publication Abstract from PubMed Elongation factor 4 (EF4) is a member of the family of ribosome-dependent translational GTPase (trGTPase) factors, along with elongation factor G (EF-G) and BPI-inducible protein A (BipA). Although EF4 is highly conserved in bacterial, mitochondrial, and chloroplast genomes, its exact biological function remains controversial. Here, we present the cryo-EM reconstitution of the GTP form of EF4 bound to the ribosome with P- and E-site tRNAs at 3.8 A resolution. Interestingly, our structure reveals an unrotated ribosome rather than a clockwise-rotated ribosome, as observed in the presence of EF4-GDP and P-site tRNA. In addition, we also observed an counterclockwise rotated form of the above complex at 5.7 A resolution. Taken together, our results shed light on the interactions formed between EF4, the ribosome, and the P-site tRNA and illuminate the GTPase activation mechanism at previously unresolved detail. Structure of the GTP form of elongation factor 4 (EF4) bound to the ribosome.,Kumar V, Ero R, Ahmed T, Goh KJ, Zhan Y, Bhushan S, Gao YG J Biol Chem. 2016 May 2. pii: jbc.M116.725945. PMID:27137929 From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. See Also Elongation factor 3D structures Ribosomal protein THX 3D structures

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