9bd6 | pdb_00009bd6

PaMsbA in an occluded, outward conformation

spinqualitylabelsall models 9bd6, resolution 2.58Å Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image   Print3D Structural highlights 9bd6 is a 2 chain structure with sequence from Pseudomonas aeruginosa. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance. Method: Electron Microscopy, Resolution 2.58Å Ligands: AD9, ZN Resources: FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT Function MSBA_PSEAE Involved in lipopolysaccharide (LPS) biosynthesis. Translocates lipid A-core from the inner to the outer leaflet of the inner membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. Publication Abstract from PubMed Proteins involved in the biogenesis of lipopolysaccharide (LPS), a lipid exclusive to Gram-negative bacteria, are promising candidates for drug discovery. Specifically, the ABC transporter MsbA plays a crucial role in translocating an LPS precursor from the cytoplasmic to the periplasmic facing leaflet of the inner membrane, and small molecules that inhibit its function exhibit bactericidal activity. Here, we use native mass spectrometry (MS) to determine lipid binding affinities of MsbA from P. aeruginosa (PaMsbA), a Gram-negative bacteria associated with hospital-acquired infections, in different conformations. Unlike the transporter from E. coli, we show that the ATPase activity of PaMsbA is stimulated by Zn(2+), Ni(2+), and Mn(2+) and successfully trapping the protein with vanadate requires one of these metal ions. We also present cryogenic-electron microscopy structures of PaMsbA in occluded and open outward-facing conformations determined to resolutions of 2.58 and 2.44 A, respectively. The structures reveal a triad of histidine residues, and mutation of these residues abolishes Zn(2+) binding and stimulation of PaMsbA activity by metal ions. Together, our studies provide insight into the structure of PaMsbA and its lipid binding preferences and reveal that a subset of divalent metals stimulates its ATPase activity. Molecular Basis for the Activation of Pseudomonas aeruginosa MsbA by Divalent Metals.,Lyu J, Bahramimoghaddam H, Zhang T, Scott E, Yun SD, Yadav GP, Zhao M, Russell D, Laganowsky A J Am Chem Soc. 2025 Aug 25. doi: 10.1021/jacs.4c18759. PMID:40851428 From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

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