9rlq | pdb_00009rlq

PARP15 catalytic domain in complex with OUL312

spinqualitylabelsall models 9rlq, resolution 1.80Å Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image   Print3D Structural highlights 9rlq is a 2 chain structure with sequence from Homo sapiens. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance. Method: X-ray diffraction, Resolution 1.8Å Ligands: A1JHB, DMS Resources: FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT Function PAR15_HUMAN Transcriptional repressor. Has ADP-ribosyltransferase activity. Publication Abstract from PubMed PARP10 is a potential drug target due to its overexpression in several cancer types and its roles in DNA repair mechanisms and tumorigenesis. In this study, we performed an optimization campaign on our earlier compounds based on a 2,3-dihydrophthalazine-1,4-dione scaffold which emerged with dual PARP10 and PARP15 inhibitory activity. The specific aim was to improve the potency and selectivity towards PARP10. Minor structural modifications led to identification of compounds that maintained nanomolar IC(50) values for PARP10 and had up to 75-fold selectivity over PARP15. The best compound 15 (6-[2-(2-fluorophenyl)ethoxy]-1,2,3,4-tetrahydrophthalazine-1,4-dione; OUL312) was also at least 18-fold over all other human enzymes of the family. Compound 15 has a good ADME profile, is able to enter cells, is not toxic, and effectively rescues human cells from PARP10 induced apoptosis at sub-micromolar concentrations. Representative compounds were co-crystallized in complex with PARP15 and PARP10 and the structures indicated that the selectivity would result from residue differences outside of the nicotinamide pocket causing subtle alterations in the environment of the fluorophenyl binding site. The established binding modes together with the functional data make the compound a useful chemical probe to study PARP10 and provide a basis for further optimization of PARP10 inhibitors. Optimization of 2,3-dihydrophthalazine-1,4-dione PARP inhibitor scaffold for nanomolar potency and specificity towards human PARP10.,Alaviuhkola J, Nizi MG, Vagaggini C, Sarnari C, Lippok B, Maksimainen MM, Bosetti C, Dhakar SS, Manfroni G, Massari S, Dreassi E, Korn P, Tabarrini O, Lehtio L Eur J Med Chem. 2025 Sep 1;300:118111. doi: 10.1016/j.ejmech.2025.118111. PMID:40914013 From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

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