9d13 | pdb_00009d13

Tt Pah2 D148N delta helix apo

spinqualitylabelsall models 9d13, resolution 1.98Å Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image   Print3D Structural highlights 9d13 is a 1 chain structure with sequence from Tetrahymena thermophila. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance. Method: X-ray diffraction, Resolution 1.98Å Ligands: GOL Resources: FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT Function I7MFJ3_TETTS Publication Abstract from PubMed Lipin/Pah phosphatidic acid phosphatases (PAPs) are Mg(2+)-dependent enzymes that catalyze the dephosphorylation of phosphatidic acid (PA) to produce diacylglycerol. Deficiency of lipin PAP activity in humans results in inflammatory disorders such as rhabdomyolysis and Majeed syndrome. Previously, we reported the first PAP enzyme structures of Tetrahymena thermophila (Tt) Pah2 at 3.0A resolution. Here, we present five new higher resolution (1.95-2.40A) structures of Tt Pah2 that represent active states of catalysis, including the product analog tungstate bound to the active site, and an inactive state with a distorted active site. The structures, in conjunction with flexible docking simulations and biochemical analysis, connect two highly conserved aspartate and arginine residues in magnesium coordination and recognition of the substrate PA. Overall, this provides a structural basis for catalysis and defines a signature Asp-Arg motif in lipin/Pah PAPs that enables recognition of their lipid substrate PA, providing insight into how the HAD domain of lipin/Pah PAPs evolved to act on a membrane embedded substrate. Structures of a lipin/Pah phosphatidic acid phosphatase in distinct catalytic states reveal a signature motif for substrate recognition.,Vitkovska T, Welcome FS, Khayyo VI, Gao S, Wymore T, Airola MV J Biol Chem. 2025 Oct 16:110830. doi: 10.1016/j.jbc.2025.110830. PMID:41109341 From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

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